Pairwise Alignments

Query, 298 a.a., EamA family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 18/289 (6%)

Query: 12  LWMLTAGLAFAIVNSVAQYASIQFGLPSTTVALVQYAIAIVVILPYLKTLGIRQSLRTQQ 71
           L +L A L  A  N + +   ++   P   + L +   A +++LP++  L  + +L+   
Sbjct: 5   LMILAAQLLIASGNLLVKL--LETNTPVFQLVLYRQLFATLLVLPFVWHL--QGNLKLSP 60

Query: 72  F-GWHLLRVFLAVIGIQLWLWALAYPVPIWQGIALLMTSPLFATIGSGLWLREKVGMARW 130
           F   HL R  L  +G  +++ A+ + +P+    A++ +SPL   + S  +L E++G  R 
Sbjct: 61  FYKVHLSRALLIGLGNAIFMLAVLH-LPLATVTAVIYSSPLILLLLSAFFLNERIGYRRS 119

Query: 131 VATLTGFIGAMIILEPWADDFNLASLLPVGAAFFWASYSLMVKKLSSHDSPSTMVVYLLL 190
           VA L GF G ++I +P   + NL   L    A   A  SL++K  S+H+ P +     L 
Sbjct: 120 VAGLIGFTGILLISQP--TEVNLYIGLAFFGAMISAINSLILKAYSTHEHPFS----TLF 173

Query: 191 LITPFNLLLALP-DWQMPNGQTVWLLLIG--AGVMTALAQWAIAKAYAVADASFVQPFDH 247
               F ++  +P  W      ++ +  +G   GV      + I  AY  ADAS + P ++
Sbjct: 174 WSNAFAMVFLIPATWYEGANFSLPVAQVGLTLGVFYVGMTYLIIHAYRRADASQMAPVEY 233

Query: 248 AKLPLNVLAGWLVFGWVPPGRLWLGAAIIVLSVAFITQWETK---KSRR 293
             L    L GW          + +G  +++ S    +  E K   KSRR
Sbjct: 234 TGLIFAALLGWWFLDETLSVVVCIGIGLVIFSSLLPSYGELKAKWKSRR 282