Pairwise Alignments

Query, 298 a.a., EamA family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 25/297 (8%)

Query: 1   MSIKHHPLQGALWMLTAGLAFAIVNSVAQYASIQFGLPSTTVALVQYAIAIVVILPYLKT 60
           MS  H P    L +L   L  A V++  +  +   GL       V+ A+A+ ++    + 
Sbjct: 3   MSSNHVPAAAGLLLLAMAL-IAFVDNFVRLIAEDAGL--WQFLAVRSAMALPLLWGVARW 59

Query: 61  LGIRQSLRTQQFGWHLLRVFLAVIGIQLWLWALAYPVPIWQGIALLMTSPLFATIGSGLW 120
            G   SLR  ++   + R  L    + L+  A+A  VPI    A L TSP+F  + S + 
Sbjct: 60  RG--WSLRPVRWRAVIQRSVLMATALTLYFAAVAV-VPIAIAGAGLYTSPIFVLLISIVL 116

Query: 121 LREKVGMARWVATLTGFIGAMIILEPWADDFNLASLLPVGAAFFWASYSLMVKKLSSHDS 180
              ++G+ R  A   GF G +++L+P +  F+  +LLPV A   +A+ +L  ++L   +S
Sbjct: 117 FGVRIGVWRAAAVALGFAGVLLVLQPGSAAFSPLTLLPVLAGALYAAGALTTRRLCMGES 176

Query: 181 PSTMVVYLLLLITPFNLL----LAL--------------PDWQMPNGQTVWLLLIGAGVM 222
           P+ +V    L++  +  L    LAL                WQ    + +WL L+ A ++
Sbjct: 177 PACLVFGFFLVMAVYGSLGLAVLALVGAGGAPGEASFFGTGWQEVTPRFLWLCLMQA-IL 235

Query: 223 TALAQWAIAKAYAVADASFVQPFDHAKLPLNVLAGWLVFGWVPPGRLWLGAAIIVLS 279
           + +A   + +AY +AD S+V  F+++ LP   + G+L++  VP     LG   I+++
Sbjct: 236 SLVAVGCLVRAYQIADPSYVSVFEYSFLPFAGVWGYLLWSDVPGPVAILGIGCILVA 292