Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., OmpK36 porin from Klebsiella michiganensis M5al

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 61/382 (15%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK   +++ V + +V+G+  AA VY+ +G  L + G+++    F+ +DKG++ + T +  
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKIDGLHYFS-DDKGQDGDQTYM-- 57

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGSL 119
              RL + GET I   + G+G WE      ++  +S +  T    R  + G+K GD GS 
Sbjct: 58  ---RLGIKGETQINDQLTGYGQWEYNVQANNTESSSDQAWT----RLAFAGLKFGDAGSF 110

Query: 120 SFGRQNTAGVQISDMSDI-GTFTGDQKAFVSAGNEQINNTIAY----------GYDFE-S 167
            +GR       ++  +D+   F GD     +    + N    Y          G +F   
Sbjct: 111 DYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFLQSRANGVATYRNSDFFGLVDGLNFALQ 170

Query: 168 FKLKASYIADD------------QKNADGYGLSGIYSAPFGLDIGLGYAANDLGTDKGS- 214
           ++ K   ++ +            ++N DGYG S  Y    G+  G  YA +    D+ S 
Sbjct: 171 YQGKNGSVSGEGTSPTNNGRGALKQNGDGYGTSLTYDIYDGISAGFAYANSKRNGDQNSQ 230

Query: 215 --------ADQIIAGLGYTMGDLYFGATYTTGDKDDKADT-----EFTGIEVSAQYKITK 261
                   A+    GL Y   ++Y  + YT      +  +     +    EV AQY+   
Sbjct: 231 LALGQGDNAETYTGGLKYDANNIYLASQYTQTYNATRVGSLGFANKAQNFEVVAQYQFDF 290

Query: 262 EFRLIAAYQNQEEETKNVT--------KDKADFFELTGRYDFTKNFRSYLAYKANGLDDK 313
             R   AY   + +   +         +D   + ++   Y F KN  +Y+ YK N LD+ 
Sbjct: 291 GLRPSVAYLQSKGKDLYINGTNRSYGDQDILKYVDVGATYYFNKNMSTYVDYKINLLDEN 350

Query: 314 D----AGYKVEDTIRLGLRYDF 331
           +    AG   +D + LGL Y F
Sbjct: 351 NFTRAAGISTDDIVALGLVYQF 372