Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., porin from Klebsiella michiganensis M5al

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 65/376 (17%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRL------EFRGDFNGNDKGEEIE 54
           MK+  +A+ V + +V+G+  AA +Y+  G  L   G++         GD N +D      
Sbjct: 1   MKRKVLAILVPALLVAGAANAAEIYNKNGNKLDFYGKMVGEHIMTHDGDNNNSD------ 54

Query: 55  GTMLNKSRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK- 113
               + S  R  + GET I + + G+G  + E  +K+      +   T   R  + G+K 
Sbjct: 55  ----DTSYARFGIKGETQISSELTGYG--QFEYNIKADKPEGQQGSAT---RLAFAGLKF 105

Query: 114 GDFGSLSFGRQNTAGVQISDMSD-IGTFTGDQKAFV-------SAGNEQINNTIAYGY-D 164
            D+GS  +GR +      +  +D +  + GD   +        + G     NT  +G  D
Sbjct: 106 SDYGSFDYGRNDGVVYDAAGYTDMLVEWGGDGLVYTDNFMTGRTNGVATYRNTDFFGMVD 165

Query: 165 FESFKLKASYIADD----QKNADGYGLSGIYSAP-FGLDIGLGYAANDLGTDKGSADQI- 218
             +F L+     +D    + N DG+G S  Y+   FG    +G  +N   TD+ +AD+  
Sbjct: 166 GLNFALQYQGKNNDTTAKKSNGDGFGFSVNYNIDGFGF---VGAYSNSDRTDEQAADKRG 222

Query: 219 ------IAGLGYTMGDLYFGATYTTGDKDDKADTEFT----------GIEVSAQYKITKE 262
                      Y   +LY    Y  G+  +    E T           IE   QY+    
Sbjct: 223 ETAEVWNLAAKYDANNLYASVMY--GESRNMTPLEKTTFGSFANHTQNIEAVVQYQFDFG 280

Query: 263 FRLIAAYQNQEEET----KNVTKDKADFFELTGRYDFTKNFRSYLAYKANGLDDKDA--- 315
            R    Y   + +     ++   D  ++ EL   Y F KNF  Y AYK N +DD+DA   
Sbjct: 281 LRPSLGYVYAKGKDLGAKEDTNADIMNYVELGTWYYFNKNFNVYTAYKFNLIDDEDAAVS 340

Query: 316 GYKVEDTIRLGLRYDF 331
           G   +D   +G+ Y F
Sbjct: 341 GAATDDQFAVGITYQF 356