Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Outer membrane porin C from Enterobacter sp. TBS_079

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 62/382 (16%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK   +++ V + +V+G+  AA +Y+ +G  L + G+++    F+ +DK  + + T +  
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFS-DDKSNDGDQTYM-- 57

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGSL 119
              RL   GET +   + G+G WE +       G ++E +     R  + G+K  D GS 
Sbjct: 58  ---RLGFKGETQVNDQLTGYGQWEYQ-----IQGNTSESDNQSWTRVAFAGLKFADAGSF 109

Query: 120 SFGRQNTAGVQISDMSDI-GTFTGDQKAFVSAGNEQINNTIAY----------GYDFE-S 167
            +GR       ++  +D+   F GD     +    + N    Y          G +F   
Sbjct: 110 DYGRNYGVIYDVTSWTDVLPEFGGDTYGADNFLQSRANGVATYRNQDFFGLVDGLNFALQ 169

Query: 168 FKLKASYIADD--------QKNADGYGLSGIYSAPFGLDIGLGYAANDLGTD-------- 211
           ++ K   ++ +        ++N DGYG S  Y+   G  IG   +++    D        
Sbjct: 170 YQGKNGSVSGENDSGRSTLKQNGDGYGASVTYNLGEGFSIGGAMSSSKRTADQNDTANLA 229

Query: 212 -KGSADQI---IAGLGYTMGDLYFGATYTT-------GDKDDKAD-----TEFTGIEVSA 255
            KG  D+      GL Y   ++Y  A Y+        G+    +D      +    EV A
Sbjct: 230 LKGEGDRAEVYSGGLKYDANNIYLAAQYSQTYNATRFGNSQSSSDIYGFANKAQNFEVVA 289

Query: 256 QYKITKEFRLIAAY-QNQEEETKNV-TKDKADFFELTGRYDFTKNFRSYLAYKANGLDD- 312
           QY+     R   AY Q++ ++ +    +D   + ++   Y F KN  +Y+ YK N +D+ 
Sbjct: 290 QYQFDFGLRPSVAYLQSKGKDIEGYGDQDLLKYVDVGATYYFNKNMSTYVDYKINLVDEN 349

Query: 313 ---KDAGYKVEDTIRLGLRYDF 331
              + AG   +D + LGL Y F
Sbjct: 350 EFTRQAGIGTDDIVALGLVYQF 371