Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Outer membrane porin N from Enterobacter sp. TBS_079

 Score =  107 bits (267), Expect = 5e-28
 Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 66/383 (17%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           M++  +A+ + + +++G+  AA +Y+ +G  L + G+++    F+ +D  ++ + T +  
Sbjct: 1   MQRKVLALIIPALLMAGAAHAAEIYNKDGNKLDLYGKVDGLHYFS-DDASKDGDQTYM-- 57

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGSL 119
              RL   GET I   M G+  WE      ++ G+  +  T    R  + G+K GD+GS 
Sbjct: 58  ---RLGFKGETQINNMMTGYAQWEYNIQANNTEGSDNQSWT----RLAFAGIKVGDYGSF 110

Query: 120 SFGRQNTAGVQISDMSD-IGTFTGDQKAFVSAGN---------EQINNTIAYG-YDFESF 168
            +GR       +   +D +  F GD  ++ +A N             NT  YG     +F
Sbjct: 111 DYGRNYGVLYDVEGWTDMLPEFGGD--SYTNADNFMTGRANGVATYRNTDFYGLVQGLNF 168

Query: 169 KLKASYIADD---------------QKNADGYGLSGIYSAPFGLDIGLGYAAND------ 207
            L+     +D                +N DG+G+S  Y    G+  G  Y ++D      
Sbjct: 169 ALQYQGKNEDASNNQEGTNNGRDTRHENGDGFGISTTYDFGMGISAGAAYTSSDRTNEQV 228

Query: 208 LGTDKG--SADQIIAGLGYTMGDLYFGATYTT-------GDKDDKADTEFTGIEVSAQYK 258
           + T  G   AD   AGL Y   ++Y  A Y+        GD  D    +   +EV+AQY+
Sbjct: 229 MNTTAGGDKADAWTAGLKYDANNIYLAAMYSETRNMTPYGDNTDAVANKTQNVEVTAQYQ 288

Query: 259 ITKEFRLIAAYQNQEEETKNVTKDKAD-----FFELTGRYDFTKNFRSYLAYKANGLDDK 313
              +F L  A    + + K++   + D     + ++   Y F KN  +Y+ YK N LD+ 
Sbjct: 289 F--DFGLRPAISYLQSKGKDLANGQGDQDLVKYADVGATYYFNKNMSTYVDYKINLLDED 346

Query: 314 DAGYK-----VEDTIRLGLRYDF 331
           D+ YK      +D + LGL Y F
Sbjct: 347 DSFYKNNGISTDDVVALGLVYQF 369