Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Outer membrane porin F from Enterobacter sp. TBS_079

 Score = 93.2 bits (230), Expect = 9e-24
 Identities = 96/376 (25%), Positives = 153/376 (40%), Gaps = 60/376 (15%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDF-NGNDKGEEIEGTMLN 59
           MK+  +AV + + +V+G+  AA +Y+  G  L + G++    DF    D  +  + T   
Sbjct: 2   MKRNILAVVIPALLVAGAANAAEIYNKSGNKLDLYGKVVGEHDFVTSGDNTDSNDATY-- 59

Query: 60  KSRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGS 118
               ++   GET I   + GFG WE       +  +  E   T + R  + G+K GD GS
Sbjct: 60  ---AQIGFKGETQINDQLTGFGQWEYR-----ALASQAESNQTQRTRLAFAGLKAGDAGS 111

Query: 119 LSFGRQNTAGVQISDMSDIG------TFTGDQKAFVSAGNEQI---NNTIAYGYDFESFK 169
           + +GR       +   +D+       T+      F++  N  +    N+  +G   +   
Sbjct: 112 IDYGRNYGIVYDVESYTDMAPSFSGMTWANYSDNFMTGRNSGLLTYRNSDFFGL-VDGLS 170

Query: 170 LKASYIADDQK------NADGYGLSGIYSAPFGLDIGL-GYAANDLGTDKGSAD------ 216
           L   Y   +++      N DG+G S  Y   FG   GL G  +N   TD  SAD      
Sbjct: 171 LGLQYQGKNERTDVRTANGDGFGTSVGYE--FGEGFGLIGAYSNSDRTDGQSADGKGEKA 228

Query: 217 -QIIAGLGYTMGDLYFGATYT-----TGDKDDKADTEFTGIEVSAQYKITKEFRLIAAYQ 270
                G  Y   ++Y   TY      T + D     +    EV AQY+   +F L  +  
Sbjct: 229 EAWAVGAKYDANNIYLATTYAETRNMTREDDGSFANKTQNFEVIAQYQF--DFGLRPSVS 286

Query: 271 NQEEETKNVTK---------DKADFFELTGRYDFTKNFRSYLAYKANGLDDKDAGYKV-- 319
             + + KN+ +         D   F EL   Y F KNF  Y+ Y+ N +DD D    V  
Sbjct: 287 YVQSKGKNLAQRGTFAGGDADLQKFVELGATYYFNKNFNIYVDYQLNLIDDTDYSRSVGI 346

Query: 320 ----EDTIRLGLRYDF 331
               +D + + + Y F
Sbjct: 347 VNGKDDQVAMAVTYQF 362