Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Outer membrane porin N from Enterobacter sp. TBS_079

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 96/393 (24%), Positives = 162/393 (41%), Gaps = 74/393 (18%)

Query: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDFNGNDKGEEIEGTMLNK 60
           MK+ A+A+ +   + +G+  AA +Y+ +G  L + G+++    F+G+   +       ++
Sbjct: 1   MKRTAMALIIPVLLAAGAAQAAEIYNKDGNKLDLYGKVDGLHYFSGDGSQDG------DQ 54

Query: 61  SRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMKGD-FGSL 119
           S VR+   GET I   M G+G WE      S+    ++  T    R  + G+K + +GS 
Sbjct: 55  SYVRMGFKGETQINDLMTGYGQWEYNFNANSTEDEGSQSYT----RLAFAGVKTEKYGSF 110

Query: 120 SFGRQNTAGVQISDMSD-IGTFTGDQKAFVSAGNEQINNTIAYG-------YDF-ESFKL 170
            +GR       +   +D +  F GD  ++ SA N                 +D  E   +
Sbjct: 111 DYGRNYGVLYDVEGWTDMLPEFGGD--SYTSADNYMTGRATGVATYRNNGFFDLVEGLNV 168

Query: 171 KASYIADDQK------------------NADGYGLSGIYSAPFGLDIGLGYAANDLGTD- 211
              Y   ++                   N DG G+S  Y    G   G  Y ++D  T+ 
Sbjct: 169 ALQYQGKNENPGRGEGTNNGADRNIRNANGDGVGVSTTYDIGMGFSAGAAYTSSDRTTEQ 228

Query: 212 ----KG--------SADQIIAGLGYTMGDLYFGATY------TTGDKDDKAD-----TEF 248
               KG         AD    G+ Y   +LY  A Y      T    +D  D      + 
Sbjct: 229 KHAGKGHSQFAGGERADAWTTGVKYDANNLYIAAMYADTRNMTPYGSNDSRDGGGIANKT 288

Query: 249 TGIEVSAQYKITKEFRLIAAY-QNQEEETKNV----TKDKADFFELTGRYDFTKNFRSYL 303
             IE++AQY++    R   +Y Q++ ++ + +     KD   + ++   Y F KN  +Y+
Sbjct: 289 QNIELTAQYQLDFGLRPAISYLQSKGKDLRLIGGGSDKDLVKYADIGATYYFNKNMSTYV 348

Query: 304 AYKANGLDDKDAGYK-----VEDTIRLGLRYDF 331
            YK N LD  D+ YK      +D + +GL Y F
Sbjct: 349 DYKINLLDGDDSFYKHNGISTDDVVAMGLVYQF 381