Pairwise Alignments

Query, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., porin from Ralstonia sp. UNC404CL21Col

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 89/351 (25%), Positives = 134/351 (38%), Gaps = 54/351 (15%)

Query: 1   MKKAAIAVAVLS--AVVSGSTLAATVY---DAEGTSLKVGGRLEFRGDFNGNDKGEEIEG 55
           MKK+ +A+AVL   A V+ +  + T+Y   DA    +     +   G       G  +  
Sbjct: 1   MKKSLLALAVLGTFAGVAQAQSSVTLYGVVDANVEYVNHAQAVTAAGVVIPGSSGSRLAM 60

Query: 56  TMLNKSRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMKGD 115
                S  R  + G  DIG G+KG   +  E G     GT  +    F  R  +VG++G+
Sbjct: 61  QAGGLSSNRWGLRGVEDIGGGLKGL--FVLESGYGMDTGTLQQGGRLFG-RQAFVGLQGN 117

Query: 116 FGSLSFGRQ-NTAGVQISDMSDIGTFTGDQKAFVSAG-NEQINNTIAYGYDFESFKLKAS 173
           +G ++ GRQ  T    +++ S  G  T  +      G N + +N I Y   F    ++  
Sbjct: 118 WGKITLGRQYTTIFDMMANFSPTGYATQYEPVVGQLGPNFREDNVIKYTGAFGPLTVEGH 177

Query: 174 YI----ADDQKNADGYGLSGIY-SAPFGLDI------------GLGYAANDLGTDKGSAD 216
           +     A  Q     YG+   Y   PFGL I             LG   N+   DK +A 
Sbjct: 178 WSFGERAGSQTANSAYGVGANYFGGPFGLGIAYDEVKVLTAAEALGGPGNEYAKDKRAA- 236

Query: 217 QIIAGLGYTMGDLYFGATYTTGDKDDKADTEFTGIEVS------------AQYKITKEFR 264
                  YT+G +     Y  G    K DT  +G  ++              Y++T    
Sbjct: 237 ---IAASYTVGPVKVMGGYRYG----KTDTASSGATLALLPHRDDYYWAGVNYQVTPALG 289

Query: 265 LIAA--YQNQEEET---KNVTKDKADFFELTGRYDFTKNFRSYL--AYKAN 308
           L  A  Y N +E T     V       ++    Y+F+K    YL  AY  N
Sbjct: 290 LTLAYYYDNIKEATIGGATVNPRNPQQWQFIADYNFSKRTDVYLSAAYARN 340