Pairwise Alignments

Query, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., Branched-chain amino acid transport protein AzlC from Pseudomonas fluorescens FW300-N2E2

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 14/217 (6%)

Query: 2   NSQVLTIDDSPTPTRLFWQGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLY 61
           +SQ L ++  P  +R F + +    P+         + G  A+ AGL +    A+   +Y
Sbjct: 5   SSQPLAVE--PQASRTFAEAS----PVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVY 58

Query: 62  AGAAQLVAIGMFKTGAGLLSLLIATFFITSRHFLYSVSMRSKISPLPL----RWRLTLGF 117
           AGA+Q  A+ +  +GA L ++++ TF I +RH L SV M   +  L L    RW    G 
Sbjct: 59  AGASQFAALALISSGASLTTIVLTTFLINARHMLMSVYMAKALRALGLSRFERWCYAAG- 117

Query: 118 LLTDELFAICGAQ--SDKQFNRWYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWGLEF 175
            LTDE FA    +  S    +  Y +G  L  +  W L  L+G V   Y   L ++ L++
Sbjct: 118 -LTDESFAFHSVKLGSGAPVSVRYLVGFNLFCHTSWVLGGLLGAVCAQYAAHLIKYQLDY 176

Query: 176 AVAATFIAIVIPNIKSWPVLISVLTALVLSVLLTVMG 212
           A+ A  + +++    +   LI+ L A+V    L+++G
Sbjct: 177 ALTAMMLYVLVSLCNTRNKLIAALAAVVCMGGLSLLG 213