Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (270), Expect = 9e-29
 Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 2/158 (1%)

Query: 117 FPQAVVYDPELASQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSAL 176
           F  A+   P+ A       + +EKS + L RET++   + +L  R G  AP      +  
Sbjct: 29  FQTALSQAPDFARTFLHQHQIIEKSPSSLERETILLDLVTQLFERSG--APIEPVSAAEQ 86

Query: 177 RPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKT 236
             +  +K  L+D     +SLEELAQL  L P +L+R F+K  G+ PH+YQIQ R+   + 
Sbjct: 87  HAVQKIKRKLEDEFDKHLSLEELAQLVNLDPLYLIRVFKKSVGVSPHSYQIQKRIAQVQK 146

Query: 237 LLKQGVSISETAQECGFHDQSHLHRHFKKALGITPKQY 274
           LL+ G S++E +  CGF DQSH+ R FKK +GITP  +
Sbjct: 147 LLRTGSSLAEASFTCGFFDQSHMTRAFKKVVGITPGSF 184