Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (302), Expect = 2e-32
 Identities = 87/262 (33%), Positives = 132/262 (50%), Gaps = 18/262 (6%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           G+E+++A  + + F RH HE + +G++ RGAQ      G   A    +I VN  EVH G 
Sbjct: 15  GVEIVEADSD-RTFVRHMHEHFGIGLLVRGAQRSASGRGQVEAMAGDLISVNPAEVHDGA 73

Query: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTG--APYFPQAVVYDPELASQLRLVFETL-- 138
               G   ++ +Y  P   A   K++  + G  A  F   V+  P  A   R +++TL  
Sbjct: 74  PIGNGTRRWQMLYFDPLLIAQAFKDMENDGGICAQEFAYPVLQSPHAAELFRTLYQTLAQ 133

Query: 139 --EKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLL--VKEFLDDFPQADV 194
             E   +  + ETL+   L  L+ R          P+S L  +     K  +DD PQ+ +
Sbjct: 134 AEEFGAHLKIEETLVLL-LEHLLDR--------SMPISCLPKVAANRAKALIDDDPQSSM 184

Query: 195 SLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFH 254
           SL  LA+ A LS F LVR F +  GL PHAY +Q R+  A+ L+  G+ +++ +   GF 
Sbjct: 185 SLALLAREADLSRFQLVRAFTRLTGLTPHAYLMQRRIHRARQLIAAGMPLADASLASGFA 244

Query: 255 DQSHLHRHFKKALGITPKQYAR 276
           DQSH+ R F ++ G +P  YAR
Sbjct: 245 DQSHMTRCFVRSFGFSPGMYAR 266