Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  114 bits (285), Expect = 2e-30
 Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 13/260 (5%)

Query: 18  AEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSF-YRTGGNHIAPQDSIILVNAD 76
           A E   +E ++A +    ++ H H+ Y +G+   G QSF YR    H  P  +I+L + D
Sbjct: 14  APESRKMERIEAYFSGHGYTTHRHDTYAIGITLSGVQSFNYRHSKRHSQPGGTIVL-HPD 72

Query: 77  EVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFE 136
           EVH G +    G+ Y+  Y  P    +V +++      P+    +  DP L    R +  
Sbjct: 73  EVHDGEAGTRDGFRYRMFYIEP----SVIQQVLGGKPLPFIEGGLSSDPRLNIATRRLLN 128

Query: 137 TLEKSTNRLLRETLIY--ASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADV 194
           +L+   + L  E  IY  A  + +   + R     D P +A R  L + + LD      +
Sbjct: 129 SLDHPLDPLEEEDAIYDVAQALDVAAGNRRGRRLIDYP-AAERARLFIHDALDQV----I 183

Query: 195 SLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFH 254
           +L++L Q +G   + L R F+  +G  P+ Y  Q RL  A+ L   G  +SE A  CGF 
Sbjct: 184 TLDDLVQASGRDRWSLSRDFRALYGTSPYRYITQRRLSEARRLAFHGTPLSEVALACGFF 243

Query: 255 DQSHLHRHFKKALGITPKQY 274
           DQSH+ R   +A GI+P ++
Sbjct: 244 DQSHMTRLHTQAFGISPARW 263