Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  115 bits (289), Expect = 8e-31
 Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 5/242 (2%)

Query: 36  FSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAMY 95
           ++ H HE +++G I  GA +++         + +++L+N   VH  +      W+Y   Y
Sbjct: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92

Query: 96  PLPEQFATVAKEIGANTGAPYFPQAVVY--DPELASQLRLVFETLEKSTNRLLRETLIYA 153
                   +  E+G ++   + P A +   D  L + L  ++ TL       LR+     
Sbjct: 93  VDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAAV 152

Query: 154 SLVKLMTRHGRTAPQADQP-LSALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVR 212
               L+ +    AP   QP    L+ L    +++ +     + LE++ Q A LSP +L+R
Sbjct: 153 EYFTLLQQ--TLAPAPTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSPSYLIR 210

Query: 213 TFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPK 272
           TF++ +G+ PHAY +  R++ ++  L+QG+ ++E A   GF DQ+H  R FK+ L  TP 
Sbjct: 211 TFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLAATPG 270

Query: 273 QY 274
           QY
Sbjct: 271 QY 272