Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 26/263 (9%)

Query: 26  LLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAV 85
           L + ++++Q +   +H   +   IE G  +F R   +       + ++ A   H     V
Sbjct: 35  LWNNRHDSQEYHAPTHHTLSC-YIEDGTGTFRRGRPDQKGAPGKLCVLPAG--HESAWVV 91

Query: 86  EGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAV-------VYDPELASQLRLVF--- 135
            G      +Y  PEQFA     +G  T     P+ +       + DP  A++ R +    
Sbjct: 92  NGEIRLAHLYFSPEQFA-----LGCVTLLDREPREMQLRENTFLEDPAQAARFRQLIRLN 146

Query: 136 --ETLEKS-TNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQA 192
             E  E+  T+ L  E + +A L +   R G        P   LR  L+  +F++     
Sbjct: 147 WAEPGERLLTSSLAHEMVSHALLNQAGLREGLRLKGGLAP--HLRRYLV--DFIEMHLAD 202

Query: 193 DVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQ-GVSISETAQEC 251
            +SL +LA L  LS +H  R F++ FGLPPH Y +  R+  A+ LL+  G  + E A  C
Sbjct: 203 PLSLGQLAGLCALSEYHFARMFRESFGLPPHQYLLARRIEQARQLLRSTGKPLGEIALAC 262

Query: 252 GFHDQSHLHRHFKKALGITPKQY 274
           GF   SH    F++A G TP +Y
Sbjct: 263 GFASASHFSNRFRQATGATPGEY 285