Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., AraC/XylS family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (287), Expect = 1e-30
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 8/272 (2%)

Query: 10  KEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69
           +E   F+ ++   G EL  A Y+  +F RH HE   +G + RGAQ+F   G  H   +  
Sbjct: 3   QEIIDFRQSQSLAGAELSRASYQRFDFGRHVHEDLHLGAVIRGAQAFNHKGTGHTLCRGD 62

Query: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELAS 129
           +  ++ DE H G +A + G+    +          A E+G + G   F Q    D  L  
Sbjct: 63  LSTLSPDECHDGIAATDTGYEVLVLSLPQWHLDRFAAELGISFGG--FCQPKRKDMALYQ 120

Query: 130 QLRLVFETLEKSTNRLLRETLI---YASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFL 186
               +   L ++ N LL ET +   +  L+   ++  +            R + L K  +
Sbjct: 121 AFVSLHRLLYQAENPLLEETALLDFFQRLLGQCSKSEKVTNTGTVKAGLSREIRLAKSLM 180

Query: 187 DDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQ--GVSI 244
            D P+  V+LE L    GL  + L+R F+ Q GL PH +Q++ RL  AK  L Q  G S+
Sbjct: 181 ADTPE-PVTLELLGDATGLGRYRLLRHFRAQTGLSPHQWQLRLRLERAKKSLMQNDGNSL 239

Query: 245 SETAQECGFHDQSHLHRHFKKALGITPKQYAR 276
           ++ A + GF D SH  RHF+ A   +P  Y R
Sbjct: 240 TDIAHQHGFSDLSHFTRHFRMAFLTSPSAYRR 271