Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  359 bits (922), Expect = e-104
 Identities = 175/268 (65%), Positives = 210/268 (78%), Gaps = 2/268 (0%)

Query: 10  KEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69
           KEQA F +A+E GG+ELLDA Y  QNFSRHSHEGYTVGVIE GAQ FYRTGG+H APQ S
Sbjct: 37  KEQANFSLAKELGGIELLDASYHQQNFSRHSHEGYTVGVIETGAQRFYRTGGDHTAPQHS 96

Query: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTG-APYFPQAVVYDPELA 128
           IILVNADEVH G SA + GW+Y+AMYPLP+QFA V  E+G   G APYFP+ VV+D  LA
Sbjct: 97  IILVNADEVHNGRSATDFGWSYRAMYPLPQQFARVHDELGGKAGDAPYFPEPVVHDKPLA 156

Query: 129 SQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDD 188
             LRL F+TL  S N LLRE+LIY SL +LM+ HG + P  ++ L     L LVK+FLDD
Sbjct: 157 ELLRLTFDTLSSSDNALLRESLIYTSLARLMSHHGASRP-VEKSLRPTAHLALVKQFLDD 215

Query: 189 FPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETA 248
            P ADVSL+ LA+LAGLSPF+L++ FQ+Q+GLPPHAYQIQ R+RLAK +++QG  + E A
Sbjct: 216 MPTADVSLDALAKLAGLSPFYLIKQFQRQYGLPPHAYQIQGRIRLAKQMIRQGCKLLEVA 275

Query: 249 QECGFHDQSHLHRHFKKALGITPKQYAR 276
             CGFHDQSHL+RHFK+A+G+TP QYAR
Sbjct: 276 LACGFHDQSHLNRHFKRAMGVTPGQYAR 303