Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  121 bits (304), Expect = 1e-32
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 15/283 (5%)

Query: 1   MMSDSAGKIKEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTG 60
           MM+ SA +  +  +  I +E   +EL  AQ+    F +H H  Y +GV+  G Q ++  G
Sbjct: 1   MMATSAVEKIDYWQASILKE---MELSRAQFTHFAFEKHVHLDYHIGVVCHGGQRYHHRG 57

Query: 61  GNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGA--NTGAPYFP 118
             +     +I  +N DE H G S  +GG+    M  LP  +    +++G   N G  YF 
Sbjct: 58  SEYRLTPGNISTLNPDESHNGQSIADGGYEALVM-SLPTSYV---QQVGGALNQGELYFS 113

Query: 119 QAVVYDPELASQLRLVFETL---EKSTNRLLRETLIYASLVKLMTRHG--RTAPQADQPL 173
             ++ DP+L +    +   L   + +   L  ETL+   + +L  RHG  R  P     L
Sbjct: 114 TPILDDPKLRAYFIRLHRQLTLHQANITPLEAETLLLGFISELFYRHGKLRNLPSCQARL 173

Query: 174 SALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRL 233
           S  +   + ++F     Q +  LE+LA    LS F  +R F+   G+ PHAY  + RL  
Sbjct: 174 SGAQLDNIKQQFHQGLDQ-EFELEQLALSVDLSKFQFLRQFKAATGMTPHAYLKRLRLEY 232

Query: 234 AKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPKQYAR 276
           AK  L +G S   TA + GF DQSH ++ FK+A  ITP  + +
Sbjct: 233 AKKALMRGDSAISTAYDLGFFDQSHFNKAFKRAFLITPAHFQK 275