Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., putative helix-turn-helix AraC-type transcriptional regulator from Klebsiella michiganensis M5al

 Score =  137 bits (346), Expect = 2e-37
 Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 13/269 (4%)

Query: 10  KEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69
           ++ A+F+   +  G+EL  A      F  H+HE + +G IE GA+ F   G  H+A  +S
Sbjct: 12  RDSARFRHLAQLPGVELYHAHISRYAFEPHTHEAFGIGAIELGAERFRYRGSQHVASVNS 71

Query: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELAS 129
           I+ +N DE+HTG +    GW Y+ +Y  P+    V  E        +F + V  DP  + 
Sbjct: 72  IVTMNPDELHTGEAETADGWRYRMIYLDPDTLEEVTGERHW-----WFSEVVRQDPLRSR 126

Query: 130 QLRLVFETLEKSTNRLLRETLIYASL--VKLMTRHGRTAPQADQPLSALRPLLLVKEFLD 187
           Q+  +   L  + + L ++ L+   +   +    H    P+A      +R      ++L 
Sbjct: 127 QIGNLIYGLWHTDDPLAQQGLLLDLIDTFRPFAHHAAALPEARHRFERVR------DYLH 180

Query: 188 DFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISET 247
           D     V+L+ELAQ+A LSP+H  R F+  F + PH   +  RL  AK  L  G+  ++ 
Sbjct: 181 DNYMRTVTLDELAQVAALSPYHFQRQFKAHFYVTPHQMLMAIRLWRAKAFLTHGMPAADV 240

Query: 248 AQECGFHDQSHLHRHFKKALGITPKQYAR 276
           A   G  DQSHL R F +  GITP +Y +
Sbjct: 241 ALAAGLTDQSHLTRAFTRRYGITPVRYQK 269