Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  131 bits (329), Expect = 2e-35
 Identities = 85/257 (33%), Positives = 133/257 (51%), Gaps = 6/257 (2%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           G+EL  A++   +F +H H  Y +GV+ +GAQ F   G  +   Q  +  +N DE H G 
Sbjct: 20  GIELSQAEFTHFSFDKHVHLDYHLGVVTQGAQQFINKGSRYQLGQHGLSTLNPDETHDGQ 79

Query: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETL-EKS 141
           S    G+  K M    E   ++++E+G    A +F   +V DP L      + + L +  
Sbjct: 80  SRDAEGYRVKVMSIPVEYMNSISQEMGLK--AHFFNAPMVDDPALYQYFIQLHDVLIQGQ 137

Query: 142 TNRLLRETLIYASLVKLMTRH--GRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEEL 199
            + L  E+ +   +  L+TRH  G    + D+ LS  + L  +K+ + D P  +  LE L
Sbjct: 138 CSELAAESHLLNFMQLLLTRHPTGMLNLRQDRGLS-WQQLNRIKQKIHDEPWQNTQLEAL 196

Query: 200 AQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHL 259
           A    LS F  +R F+   G+ PHAY  + RL LAK  L  G  +++ AQ+ GF DQSHL
Sbjct: 197 ADEVNLSKFQFLRQFKLATGMTPHAYLKRVRLELAKKSLTHGALVADVAQQLGFFDQSHL 256

Query: 260 HRHFKKALGITPKQYAR 276
           ++ FK+A  ++P Q+ R
Sbjct: 257 NKAFKQAFLLSPVQFQR 273