Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  358 bits (918), Expect = e-104
 Identities = 172/266 (64%), Positives = 206/266 (77%)

Query: 11  EQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSI 70
           E A + IA E GGLELL+A Y  QNFSRH+HEGYTVGVIE GAQ FYRTGGNH+AP+ SI
Sbjct: 4   EHAAYHIANELGGLELLNAHYHKQNFSRHTHEGYTVGVIETGAQRFYRTGGNHVAPKHSI 63

Query: 71  ILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQ 130
           ILVNADEVH G SA E GW+Y+AMYP+P QFA + +E  +  GAPYFPQ VV DPELA  
Sbjct: 64  ILVNADEVHNGCSATEDGWSYRAMYPVPAQFANITQEFTSTRGAPYFPQPVVQDPELAEL 123

Query: 131 LRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFP 190
           LRL F TL+ S NRLLRE+L+Y+SL +LM RHGR  P      +A   L LVK F+DD P
Sbjct: 124 LRLTFSTLDTSDNRLLRESLVYSSLTQLMARHGRNYPCEHLGANAKPALALVKSFIDDHP 183

Query: 191 QADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQE 250
            AD+SLEELA LAGLSP++L+R FQ+ +GLPPHAYQ QAR+RLAK  + QG+ + + A E
Sbjct: 184 AADISLEELATLAGLSPYYLLRQFQRCYGLPPHAYQTQARVRLAKQKIGQGIKLLDVAME 243

Query: 251 CGFHDQSHLHRHFKKALGITPKQYAR 276
           CGFHDQSHL+RHFKK +G+TP Q+A+
Sbjct: 244 CGFHDQSHLNRHFKKTVGLTPGQFAK 269