Pairwise Alignments

Query, 209 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., L-lysine permease from Pseudomonas fluorescens FW300-N2E2

 Score = 85.5 bits (210), Expect = 7e-22
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 12/211 (5%)

Query: 1   MIDVSVLPVYLTAVLALLLIPGPDMLLIASSSMSYGRRVGLFASLGNATSGMILTLLAAL 60
           MI +  L ++  A L ++L PGP+M+ + S S+  GR+ G+ + LG      +    AA 
Sbjct: 1   MIPLPDLLIFAAAALLMVLTPGPNMIYLISRSICQGRKAGVTSLLGVVAGFFVHMFAAAA 60

Query: 61  GVSALIAMNPLALNVLHLLGGAYLLKMAWDCLRA------DAAQAPTLDEAQAVAKTFYQ 114
           G++A+    P+A  VL   G  YLL +AW  ++       +A Q P     + +   F+ 
Sbjct: 61  GLTAVFLAVPMAYEVLKWAGALYLLWLAWQAVKPGARSPFEAQQLPADSTRKLITMGFFT 120

Query: 115 RALVSNLLNPKALVFFVLFLPQFVSTNIAASSAEQMFALGMVLNVCGLLFNLLLVALIGV 174
            A     LNPK  VF++   PQF+S     S   Q   LG+         NLL+      
Sbjct: 121 SA-----LNPKIAVFYLSVFPQFISPE-HGSLFTQSIILGLTQISVSFSVNLLIALFAAG 174

Query: 175 FGRSLVDNQRFRTYQHKVMGAVFLLLALWML 205
                V N  +   Q   MG V   LAL ++
Sbjct: 175 IASWFVHNPTWLAAQRYFMGFVLGALALRLM 205