Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

 Score =  640 bits (1650), Expect = 0.0
 Identities = 321/609 (52%), Positives = 433/609 (71%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +F+ FE   D F       PPN +  F  +Y +       V+ ++    A+IEV+LF ++
Sbjct: 2   VFRRFETLIDIFRDAPSSAPPNRVLPFYTYYLKQVWPSFAVLLVVGLIGALIEVALFSYL 61

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
            +++D    +    F   +   L  + ++ LV  P+ +A + LL+HQ+L       IRW 
Sbjct: 62  SRIIDLTQGTPNVDFFKVHGLELAWMAVVALVFRPIFVALHDLLVHQTLSPGMTSLIRWQ 121

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            H Y+LKQS++F+Q++FAGRI+ ++MQT  ++R++ ++++D   +V++Y  + +V+ A+A
Sbjct: 122 NHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAISSLVLFAEA 181

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           DWRLMIP+L+W+A Y+    Y+VP++K+ +   +DARS + GRIVD YTNI T+KLF+H+
Sbjct: 182 DWRLMIPLLMWIAAYIGALCYFVPRVKERSVVSSDARSKLMGRIVDGYTNITTLKLFAHT 241

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
             E QYA E +Q+         R+VT  ++ +   N LL+     L+++LW  S ISVGA
Sbjct: 242 NFEQQYAREAIQEQTEKAQLAGRVVTSMDVVITSMNGLLIVGTTGLALWLWTQSLISVGA 301

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           IA+A  L +RI  MS WIMW V+ +FENIG V DG+  + +P++VTD+  AKPL V  G 
Sbjct: 302 IALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVSVTDRDQAKPLAVARGE 361

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           + F+ V FHYG+  GVI  LNL IKPGEK+GL+G SGAGKSTLVNLLLR +DV+ GRILI
Sbjct: 362 VRFEHVDFHYGKKSGVIGDLNLIIKPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILI 421

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ I+EV QESLR +IGM+TQDTSLLHRSIRDN+LYG P+AT+ QL +A  +A A EFI
Sbjct: 422 DGQDIAEVGQESLRERIGMITQDTSLLHRSIRDNLLYGKPDATDAQLWEAVRKARADEFI 481

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
             L+D  G +G+DA VGERGVKLSGGQRQRIAI+RVLLKDAP+L++DEATSALDSEVEAA
Sbjct: 482 PLLSDAEGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAA 541

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQESL  LMQGKTVIAIAHRLSTIA MDRL+VL+ G+I E G+H EL+A  G+YA LW H
Sbjct: 542 IQESLETLMQGKTVIAIAHRLSTIARMDRLVVLENGRIAETGSHAELLAHGGLYARLWQH 601

Query: 601 QTGGFIGCD 609
           QTGGF+G D
Sbjct: 602 QTGGFVGID 610