Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N1B4

 Score =  634 bits (1635), Expect = 0.0
 Identities = 314/609 (51%), Positives = 435/609 (71%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +++ FE   D F       PP+ +  F  +Y +       V+ ++    A+IEV+LF ++
Sbjct: 2   LYRRFEKLIDIFRDAPTAAPPDRVLPFYTYYLKQVWPSFAVLLIVGLFGALIEVALFSYL 61

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
            +++D    +    F  ++   L  + ++ LV  P+ +  + LL+HQ+L  +    IRW 
Sbjct: 62  SRIIDLAQGTPNADFFKDHGIELAWMAVVALVLRPIFVGLHDLLVHQTLSPSLTSLIRWQ 121

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            H Y+LKQS++F+Q++FAGRI+ ++MQT  ++R++ ++++D   +V++Y  + +V+ A+A
Sbjct: 122 NHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAISSLVLFAEA 181

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           DWRLMIP+L W+A ++    Y+VP++K+ +   +DARS + GRIVD YTNI T+KLF+H+
Sbjct: 182 DWRLMIPLLTWIAAFIGALYYFVPRVKERSVVSSDARSKLMGRIVDGYTNITTLKLFAHT 241

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
             E QYA E +++         R+VT  ++ +   N LL+ +   L+++LW  S ISVGA
Sbjct: 242 NFEQQYAREAIKEQTEKAQLAGRVVTSMDVAITSMNGLLIVSTTGLALWLWTQSLISVGA 301

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           IA+A  L +RI  MS WIMW V+ +FENIG V DG+  + +P+++TD+  AKPL V  G 
Sbjct: 302 IALATGLVIRIVNMSGWIMWVVTGIFENIGMVQDGLQTISQPVSITDREQAKPLKVARGE 361

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           + FD V FHYG+  G+I+ LNL IKPGEK+GL+G SGAGKSTLVNLLLR +DV+ GRILI
Sbjct: 362 VRFDHVDFHYGKKSGIISDLNLTIKPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILI 421

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ I+EV QESLR +IGM+TQDTSLLHRSIRDN+LYG P+AT+ +L +A  +A A EFI
Sbjct: 422 DGQNIAEVGQESLRERIGMITQDTSLLHRSIRDNLLYGKPDATDAELWEAVHKARADEFI 481

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
             L+D  G +G+DA VGERGVKLSGGQRQRIAI+RVLLKDAP+L++DEATSALDSEVEAA
Sbjct: 482 PLLSDSEGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEAA 541

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQESL  LMQGKTVIAIAHRLSTIA MDRL+VL+ G+I E G+H EL+A  G+YA LW H
Sbjct: 542 IQESLETLMQGKTVIAIAHRLSTIARMDRLVVLENGKIAETGSHAELLAHGGLYARLWQH 601

Query: 601 QTGGFIGCD 609
           QTGGF+G D
Sbjct: 602 QTGGFVGID 610