Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

 Score =  644 bits (1662), Expect = 0.0
 Identities = 321/610 (52%), Positives = 441/610 (72%), Gaps = 1/610 (0%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +F+ FE   D F       PP  +  F  HY +     +  + ++    A+IEV+LF F+
Sbjct: 2   LFRRFENLIDVFKPSPDVAPPAGMLRFYAHYLKQVWPLMTAVLVVGFFAALIEVALFSFL 61

Query: 61  GQLVDWL-STSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRW 119
           GQL+D   +T    TF  E+++ L+ +  + L+  PL+   ++LL HQ++       IRW
Sbjct: 62  GQLIDMAQATDDARTFFAEHRNELLWMAAVALIIRPLVFGLHNLLTHQAINPGLTNLIRW 121

Query: 120 LAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQ 179
             HRY+LKQS++F+Q++FAGRI+ +VMQT  ++R++ M+ +D   +V+VY  + + + A 
Sbjct: 122 QNHRYVLKQSLNFFQNDFAGRIAQRVMQTGPSLRDSAMQVIDALWHVVVYAGSALYLFAA 181

Query: 180 ADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSH 239
           AD RL++P+L+W+  Y     Y+VP+++  ++  + ARS + GR+VD Y+N+ T+KLF+H
Sbjct: 182 ADLRLIVPLLLWIVGYSAALWYFVPRIRARSAAASAARSKVMGRVVDGYSNVATLKLFAH 241

Query: 240 SQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVG 299
           S+ E  YA E MQ+ LG    Q R++T  +  +   N LL+    AL+++LW  + I+ G
Sbjct: 242 SREEESYAREAMQELLGKFRLQSRVITSLDFLITCMNGLLIVGTGALALWLWSEALITTG 301

Query: 300 AIAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHG 359
           AIA+A+ L +RIN M++WIMW V+ +FEN+GTV DGM  + +P  V D  DA+PL V+ G
Sbjct: 302 AIALALGLVIRINNMAEWIMWVVNGIFENVGTVQDGMKSIVRPRDVLDPEDAEPLQVEQG 361

Query: 360 GITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRIL 419
           G+ F+DV FHYG+  GVI+ L+++I+PGEK+GLVG SGAGKSTLVNLLLR +D+ESGRIL
Sbjct: 362 GVRFEDVHFHYGKQGGVISGLSIDIRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRIL 421

Query: 420 IDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEF 479
           IDGQ ++EV+QESLR+ +G+VTQDTSLLHRSIRDN+ YG P+ATEE+L  A  +A A EF
Sbjct: 422 IDGQNVAEVSQESLRANVGVVTQDTSLLHRSIRDNLRYGKPDATEEELWAAARKARADEF 481

Query: 480 ILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEA 539
           I  L D  G  G++A VGERGVKLSGGQRQRIAI+RVLLKDAP+LVLDEATSALDSEVEA
Sbjct: 482 IKALDDSQGGLGFEAMVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSEVEA 541

Query: 540 AIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWA 599
           AIQESL+ LM+GKTVIAIAHRLSTIA MDRL+V+D GQ++E GTH ELIA+ G+YA LW 
Sbjct: 542 AIQESLDTLMEGKTVIAIAHRLSTIARMDRLVVIDGGQVIETGTHAELIARGGLYARLWQ 601

Query: 600 HQTGGFIGCD 609
           HQTGGF+G D
Sbjct: 602 HQTGGFVGVD 611