Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score =  276 bits (707), Expect = 1e-78
 Identities = 190/599 (31%), Positives = 307/599 (51%), Gaps = 34/599 (5%)

Query: 29  RHYTRGFEKPLIVMALLSTAIAIIEVSLFGFMGQLVDWLSTSSPDTFLTENQSTLIGLGL 88
           R + R +   L+V  LL   +A    +  G    L+D     +   F  +++  L+ + L
Sbjct: 24  REWVRPYTGKLMVSFLLMAVVA----AATGAYPLLID----QAYSMFSEQDRGMLLVIPL 75

Query: 89  LVLV--GMPLLIAFYSLLIHQSLLGNYPMSIRWLAHRYLLKQSVSFYQDEFAGRISTKVM 146
           L++V   +  L  +   ++   ++      +R     +LL+   +       G ++++ +
Sbjct: 76  LIIVVTAVKALSMYSQTVVTTDIVQRIITDVRLSMFDHLLRSDTAQLHAAPTGTLTSRFI 135

Query: 147 QTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWLAIYVTVQMYYVPKL 206
                +R  + ++L   V  ++   A+V  +   DW L + + +   I     +    +L
Sbjct: 136 SDVDLIRNALSRTLTGLVRDILTVIALVGSMFYLDWVLSLIVFLIYPIAAIPIVNIGKRL 195

Query: 207 KKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVHRQMRLVT 266
           ++V+ +       M+  + +S      VK +S    E   A    +D      +  R  +
Sbjct: 196 RRVSRDTQAQMGDMTALLTESLAGARMVKTYSLEDYERARAARAFEDNFALTMKATRARS 255

Query: 267 GFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVAVSLSL------RINGMSKWIMW 320
             +  +E+     V  + A + Y       SVGA +  V   L      R  G    ++ 
Sbjct: 256 RIDPMMEVLGGAAVAGVIAFAGYRMAMGEGSVGAFSGFVGALLMAAQPVRAIGTLNAVLQ 315

Query: 321 EVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSFHYGENKGVINHL 380
           E  A  + I  +VD      KP T+T++P AKPL V+   ++  DV F Y E    +  +
Sbjct: 316 EGLAAAQRIFELVDE-----KP-TITEQPGAKPLAVERAAVSLRDVRFAYEEGTETLKGI 369

Query: 381 NLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQESLRSKIGMV 440
           +L++  G  V LVGRSGAGKST+ NL+ R +D   G++LIDGQ +  VT +SLR  I +V
Sbjct: 370 DLDVPAGATVALVGRSGAGKSTVFNLIPRLYDATGGQVLIDGQDVRAVTLKSLRGVISLV 429

Query: 441 TQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGYDAQVGERG 500
           +QDT L + ++R NI +G  +A  + ++ A   A AH+F+  L +     GYD  +G+RG
Sbjct: 430 SQDTVLFNDTVRANIAFGRLDAPFDDIVAAAKAAAAHDFVARLPE-----GYDTVIGDRG 484

Query: 501 VKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGKTVIAIAHR 560
           VKLSGG+RQR+A++R  LKDAP+L+LDEATSALDSE E  +Q +L  L QG+T + IAHR
Sbjct: 485 VKLSGGERQRLALARAFLKDAPILLLDEATSALDSESERLVQGALERLTQGRTTLVIAHR 544

Query: 561 LSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQTGGFIGCDEDEVEEAILA 619
           L+T+   DR++V++ G+I+EQGTH  LIAQNG YA L   Q G       ++ E A+LA
Sbjct: 545 LATVRNADRIVVMEGGRILEQGTHDTLIAQNGTYARLCKLQFG-------EDGEAALLA 596