Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., ABC transporter, transmembrane region:ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  673 bits (1737), Expect = 0.0
 Identities = 330/609 (54%), Positives = 450/609 (73%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +++ FE   D F       PPNT++AF  +Y R        + ++    A+IEVSLF ++
Sbjct: 2   LYRRFEKLIDIFKDAPTAAPPNTVFAFYLYYLRQVWPTFTALLVVGLIGALIEVSLFSYL 61

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
            +++D   T+ P+ F + + S LI + ++ L+  P+ +  + LL+HQ++       IRW 
Sbjct: 62  SRIIDLAQTTPPENFFSIHGSELIWMVVVALLLRPIFVGLHDLLVHQTISPGMTNLIRWQ 121

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            H ++LKQSV+F+Q++FAGRI+ ++MQT  ++R++ ++++D   +V++Y  + +V+ A+A
Sbjct: 122 NHSHVLKQSVNFFQNDFAGRIAQRIMQTGNSLRDSAVQTVDALWHVLIYAISAMVLFAEA 181

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           DWRLMIP+  W+A ++   MY+VP++K+ + + +DARS + GRIVD YTNI T+KLF+H+
Sbjct: 182 DWRLMIPLGTWIAAFILSLMYFVPRVKQRSVDSSDARSRLMGRIVDGYTNITTLKLFAHT 241

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
             E QYA E M+D         R+VT  +  +   N +L+ T   L+++LW  S ISVGA
Sbjct: 242 NHEQQYAREAMRDHTEKSQLAGRVVTSMDTTITTMNGILIVTTTGLALWLWTQSIISVGA 301

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           IA+A  L +RI  MS WIMW V+ +FENIGTV DG+  + +P+TV DKP A PL +++GG
Sbjct: 302 IALATGLVIRIVNMSGWIMWVVNGIFENIGTVQDGLESISQPVTVNDKPGALPLKIENGG 361

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           + FD V FHYG   G+I++LNL+IKPGEK+GL+G SGAGKSTLVNLLLR +DV+ GRILI
Sbjct: 362 VRFDGVDFHYGNGNGIIHNLNLDIKPGEKIGLIGPSGAGKSTLVNLLLRMYDVQGGRILI 421

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ ISE+TQESLR++IGM+TQDTSLLHRSIR+N+LYGNP+AT+EQL ++  +A A EFI
Sbjct: 422 DGQDISEITQESLRAQIGMITQDTSLLHRSIRENLLYGNPHATDEQLWESIHKARADEFI 481

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
             L+D  G +G+DA VGERGVKLSGGQRQRIAI+RVLLKDAP+L++DEATSALDSEVEAA
Sbjct: 482 PLLSDSEGRTGFDAHVGERGVKLSGGQRQRIAITRVLLKDAPILIMDEATSALDSEVEAA 541

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQESL  LMQGKTVIAIAHRLSTIA MDRL+VL+KGQI E GTH EL+A  G+YA LW H
Sbjct: 542 IQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEKGQIAETGTHSELLAHGGLYARLWQH 601

Query: 601 QTGGFIGCD 609
           QTGGF+G D
Sbjct: 602 QTGGFVGVD 610