Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., ABC transporter, transmembrane region:ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  272 bits (696), Expect = 3e-77
 Identities = 176/544 (32%), Positives = 302/544 (55%), Gaps = 33/544 (6%)

Query: 75  FLTENQSTLI-GLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMS-IRWLAHRYLLKQSVSF 132
           F+T +   L   +G  +L+ + L +  ++     S +G   ++ +R     +L++    F
Sbjct: 56  FMTRSPQLLERSIGFFMLLTVGLAVGTFARFYLVSWIGERVVADLRKKVFDHLIELHPGF 115

Query: 133 YQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWL 192
           Y++  +  I +++      ++  +  SL +F+   +     +V+L   + +L   +++ L
Sbjct: 116 YENNRSSEIQSRLTADTTLLQSVIGSSLSMFLRNALMVIGGIVLLFITNPKLTSIVVVAL 175

Query: 193 AIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQ 252
            + +   + +  +++ ++ E  D  + +   + ++   I TV+ ++H Q++ Q     ++
Sbjct: 176 PLIIAPILMFGRRVRNLSRESQDRVANVGSYVAEALGQIKTVQAYNHQQQDKQRFSHTVE 235

Query: 253 DFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLW------ITSAISVGAIAVAVS 306
               T  +++   +    W  +   ++V  + A+++ LW      I+  IS G +A  V 
Sbjct: 236 QAFETARKRILQRS----W--LITLVIVLVLGAVAVMLWVGGMDVISGRISSGELAAFVF 289

Query: 307 LSLRINGMSKWIMWEV-------SALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHG 359
            +L + GM+   + EV       +   E IG ++   + +  P   TD     P +   G
Sbjct: 290 YALMV-GMAFGTLSEVIGDLQRAAGAAERIGELLQARSEISVP--TTDLQSLPPRI--SG 344

Query: 360 GITFDDVSFHYGEN--KGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGR 417
            +  ++V+F Y     +  +++L L+I+PGE + LVG SGAGKST+++LLLRF+D   GR
Sbjct: 345 RLALENVTFAYPSRPERNALDNLTLSIEPGETLALVGPSGAGKSTILDLLLRFYDPIQGR 404

Query: 418 ILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAH 477
           ILI+G PI+++    LR    +V+Q  +L   ++ DNI YGN  A+ EQ+  A   AHAH
Sbjct: 405 ILIEGVPIAQLDHHDLRRCFALVSQSPALFFGTVEDNIRYGNATASLEQVQAAARIAHAH 464

Query: 478 EFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEV 537
           EFIL + D     GY   +GE GV LSGGQRQR+AI+R LL DAP+L+LDEATSALD++ 
Sbjct: 465 EFILDMAD-----GYRTHLGEGGVGLSGGQRQRLAIARALLVDAPILLLDEATSALDAQS 519

Query: 538 EAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHL 597
           E  IQ++L  LMQG+T + IAHRL+T+   DR+ V+D+G++V  GTHQ+LIA N +YA L
Sbjct: 520 EHLIQQALPSLMQGRTTLVIAHRLATVQNADRIAVMDQGRLVAVGTHQQLIASNPLYARL 579

Query: 598 WAHQ 601
            A Q
Sbjct: 580 AALQ 583