Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  273 bits (699), Expect = 1e-77
 Identities = 191/590 (32%), Positives = 314/590 (53%), Gaps = 41/590 (6%)

Query: 24  LWAFCRHYTRGFEKPLIVMALLSTAIA-IIEVSLFGFMGQLVDWLSTSSPDTFLTENQST 82
           LW +   +     K  I++ALL   IA +  V +   +  LVD L     +  +      
Sbjct: 22  LWPYLLEF-----KGRILLALLCLLIAKLASVGMPFLLKGLVDDLDAGRSEALVA----- 71

Query: 83  LIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYP-MSIRWLA---HRYLLKQSVSFYQDEFA 138
            + LGL++  G   L+   +  I  +L G     +IR L      +L +  + F+ +   
Sbjct: 72  -VPLGLVLAYGGTRLLMSITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRT 130

Query: 139 GRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIV-VILAQADWRLMIPMLIWLAIYVT 197
           G +S  + +    V   +   +   V  ++    +V +   +  W+     L+ + +Y+ 
Sbjct: 131 GGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIALVVGIFFVKYGWQFAGITLVSVILYIG 190

Query: 198 VQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGT 257
             +       +   + A A S+ + R +DS  N  TVK F++ + E+ + ++ ++ +  T
Sbjct: 191 FSVVATEWRTEYVRQAAKADSVSNTRAIDSLLNYETVKYFNNERFESAHYDKALEAW-ET 249

Query: 258 VHRQMRLVTGFNIWVEMANYLLVFTIA-----ALSIYLWITSAISVGAI----AVAVSLS 308
             R  RL    +++       L+  IA     AL+      S +++G      A  + L 
Sbjct: 250 AKRNNRL----SLFALNGGQALIIAIAMTAMMALAAKHVTESQMTLGDFVLINAFMMQLF 305

Query: 309 LRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSF 368
           + +N +  ++  E+     NI  +     +L K   + DK DA     + G I F+ V+F
Sbjct: 306 MPLNFLG-FVYREIRGALANIERMFG---LLDKTPRIEDKTDAVNFACQRGEIRFEQVNF 361

Query: 369 HYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEV 428
            Y E + +++ ++  + PGEKV +VG SGAGKSTL+ LL RF+DV+SGRI ID   + ++
Sbjct: 362 SYDE-RTILSDVSFTVAPGEKVAVVGDSGAGKSTLIKLLFRFYDVDSGRICIDDMDLRDM 420

Query: 429 TQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHG 488
           TQ+SLR  I +V QDT L + S+ +NI YG P+A++E++      AH  +F+  L     
Sbjct: 421 TQDSLRRAIAIVPQDTVLFNDSLLENIRYGRPDASDEEVRAVVRHAHLADFVAALP---- 476

Query: 489 NSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNEL 548
            SG+D +VGERG+KLSGG++QR+AI+R +LK +P+LV DEATS+LDS  E AI ++L E+
Sbjct: 477 -SGWDTKVGERGLKLSGGEKQRVAIARAMLKGSPILVFDEATSSLDSRAEKAILDALKEV 535

Query: 549 MQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLW 598
             G T + +AHRLSTI   DR++VL KG+I EQGTH++L+A +G+YA LW
Sbjct: 536 ATGHTSLVVAHRLSTIVDADRILVLSKGRIAEQGTHKQLLAMDGLYARLW 585