Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

 Score =  276 bits (706), Expect = 2e-78
 Identities = 172/495 (34%), Positives = 267/495 (53%), Gaps = 19/495 (3%)

Query: 116 SIRWLAHRYLLKQ---SVSFYQDEFAGRISTKVMQTALAVRETV-MKSLDVFVYVMVYFT 171
           ++R LA+R  +     S+ F+ +   G ++  + +  L +   V M  L +   ++    
Sbjct: 131 AVRKLAYRTFVHMHDLSLRFHLERKTGGLTRVLERGRLGIEVIVRMVILQLVPTIIELSL 190

Query: 172 AIVVILAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNI 231
            + V+L Q DWR +  +++ +  Y+            +     D+ S  + + +DS  N 
Sbjct: 191 VMAVLLWQFDWRYVAAVMVTVVFYMLYTYKATEWRIGIRRRMNDSDSDANQKAIDSLLNY 250

Query: 232 MTVKLFSHSQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLW 291
            TVK F   +RE +  ++ M+ +         + T  ++ V  A   ++FT    +  L 
Sbjct: 251 ETVKYFGAEEREAKRYDKSMRHY-----EDASVATYTSLAVLNAGQAVIFTFGLTATMLM 305

Query: 292 ITSAI-----SVGAIAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVT 346
             S +     +VG   +  ++ +++     ++      + + I  +     +L +   V 
Sbjct: 306 CASGVRNGTNTVGDFVMINAMMIQLYQPLNFMGMVYREIKQAIIDIEKMFAVLSRKPEVE 365

Query: 347 DKPDAKPLVVKHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNL 406
           D+  AKPL V+ G + F+DV F Y   + ++  LN  +  G+ V +VG SGAGKST+  L
Sbjct: 366 DRAGAKPLAVEAGTVRFEDVKFAYDPARPILKGLNFEVPAGKTVAIVGPSGAGKSTISRL 425

Query: 407 LLRFHDVESGRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQ 466
           L R +DV  GRILIDGQ I  VTQ SLR+ IGMV QDT L + +IR NI YG  +AT+ +
Sbjct: 426 LFRLYDVSGGRILIDGQDIRSVTQTSLRAAIGMVPQDTVLFNDTIRYNIRYGRWDATDAE 485

Query: 467 LLKATAQAHAHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVL 526
           + +A   A    FI          GYD +VGERG+KLSGG++QR+AI+R +LK  P+LVL
Sbjct: 486 VEEAAKTAQIDAFIKA-----SPKGYDTEVGERGLKLSGGEKQRVAIARTVLKAPPILVL 540

Query: 527 DEATSALDSEVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQE 586
           DEATSALDS  E  IQ +L  + Q +T + IAHRLSTI   D +IVLD+G+I E+GTH +
Sbjct: 541 DEATSALDSHTEHEIQGALERVAQNRTSLVIAHRLSTIVGADEIIVLDQGRIAERGTHSQ 600

Query: 587 LIAQNGIYAHLWAHQ 601
           L+A  G+YA +W  Q
Sbjct: 601 LLAAGGLYASMWNRQ 615