Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  250 bits (639), Expect = 1e-70
 Identities = 173/588 (29%), Positives = 309/588 (52%), Gaps = 36/588 (6%)

Query: 22  NTLWAFCRHYTRGFEKPLIVMALLSTAI-AIIEVSLFGFMGQLVDWLSTSSPDTFLTENQ 80
           + LW F R Y     + L+ MA L+  + A + ++L   + ++VD    S     L +  
Sbjct: 24  SALWPFMRPY-----RVLMAMATLALVLTAGLSLTLPLAVRRVVDNFRISEA-ALLNQYF 77

Query: 81  STLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWLAHRYLLKQSVSFYQDEFAGR 140
           +  + +  L+ VG  L  A  + L  + +       IR      ++  S +F++    G 
Sbjct: 78  AAALVIAALLAVGTGLRYALVTRLGERVVA-----DIRKAVFDRVIGMSPAFFEQIMTGE 132

Query: 141 ISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWLAIYVTVQM 200
           + +++      ++  +  S+ + +  M+ F   +V++     +L   +L+ +   +   +
Sbjct: 133 VLSRITTDTTLIQSVLGSSVSIALRNMLIFIGGLVLMLLTSAKLTSLVLLIVPAVIVPIL 192

Query: 201 YYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSH---SQRETQYAEEGMQDFLGT 257
               +L+K++ E  D  +  SG   ++   + TV+ ++H   S+ E     E   D    
Sbjct: 193 VLGRRLRKISRENQDWIAASSGNAGEALGAVQTVQAYTHEVASRSEFSRLTETAFDVSMR 252

Query: 258 VHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVAVSLSLRINGMSKW 317
             +    +T   I++  +  + V  + A  +   I   +S G +   V  ++ + G    
Sbjct: 253 RIQTRAFLTVIVIFLVFSGVVGVLWMGANDVRAGI---MSEGTLVQFVIYAVLVAGS--- 306

Query: 318 IMWEVSALFENIGTVVDGMTMLGKPITVTDK------PDAKPLVVKHGGITFDDVSFHYG 371
            +  +S ++  +         L + +T  D+      P A    V+ G I FDDVSF Y 
Sbjct: 307 -VAALSEIWSELQRAAGATERLVELLTAVDQVQDPYAPRALAAPVR-GEIRFDDVSFRYP 364

Query: 372 ENKGV--INHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVT 429
               +  +  ++L ++PGE V  VG SGAGK+T++ ++ RF+D  SG + +DG+P+ ++ 
Sbjct: 365 ARPQIPALVDVSLTVQPGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQ 424

Query: 430 QESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGN 489
           ++  R  I +V QD  +   S RDNI +G P A++ ++  A   A AH+FI  L +    
Sbjct: 425 RDDFRQHIALVPQDPVIFALSARDNIRFGRPGASDAEVEAAARAAAAHDFISALPE---- 480

Query: 490 SGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELM 549
            GYD+QVGERGV LSGGQ+QRIAI+R +L+DAP+L+LDEATSALD+E E  +Q +++EL 
Sbjct: 481 -GYDSQVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAAVDELS 539

Query: 550 QGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHL 597
           QG+T + +AHRL+T+   DR++V+++G+I+  GTH +L+A++G+YA L
Sbjct: 540 QGRTTLIVAHRLATVKKADRIVVMEEGRIIATGTHDQLVAEDGLYARL 587