Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., antibiotic ABC transporter ATP-binding protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  263 bits (673), Expect = 1e-74
 Identities = 194/601 (32%), Positives = 318/601 (52%), Gaps = 51/601 (8%)

Query: 35  FEKPLIVMAL---LSTAIAII-EVSLFGFMGQLVDWLSTSSPDTFLTENQSTLIGLG--- 87
           F KP+   A+   ++T  AII    LF  +G L++ L      T L++  S++  +G   
Sbjct: 10  FAKPIEKFAIPYIIATLFAIIFNTFLFTLLGPLLETLFIKDAPTTLSKVSSSIDFMGKFS 69

Query: 88  ----------------------LLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWLAHRYL 125
                                 ++V V +  L  + S    + L  +  +++R      +
Sbjct: 70  QYIQHAIDAYGKTETLKLVCIVIVVTVILANLFRYLSQRFMEDLRVHTLLNLRRTVFNNV 129

Query: 126 LKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLM 185
           +   V F+ +E  G I +KV      V+ TV  +L V     +     V +L     +L 
Sbjct: 130 MNLHVGFFNNERKGDIISKVASDVQVVQFTVTNTLQVIFKEPLQLLFYVGVLISISVKLT 189

Query: 186 IPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQR-ET 244
           +  L+ + +   +    V +LK  A E  ++ + M G + +S + I  +K F+ + R + 
Sbjct: 190 LFSLLVIPVSGFIISKIVKRLKHQAKESHESFAKMIGFLDESLSGIKIIKAFNATPRIKD 249

Query: 245 QYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVA 304
           ++ +E    F   ++R+M       +   ++  L VF +  + +Y         G +  A
Sbjct: 250 KFDQENK--FYSYLNRKM--ARRQQLASPVSQTLGVFVVVFIVLYGGTMILTGQGDLTPA 305

Query: 305 VSLSLRINGMSKWIMWEVSALFENIGTVVDGMT--------MLGKPITVTDKPDAKPLVV 356
             L + I   S+ +M  V AL ++   +  G+         M  KP+ V + PDAK L  
Sbjct: 306 KFL-VYIATFSQ-VMQPVKALTDSFSGIHSGIAAGERVLDLMDTKPLLV-NAPDAKVLDG 362

Query: 357 KHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESG 416
            +  I+  DVSF YGE K ++N +   I+ G+ V LVG SG GKSTL++LL RFHD +SG
Sbjct: 363 FNSAISLQDVSFSYGE-KQILNSITFEIEKGKTVALVGPSGGGKSTLMDLLPRFHDPKSG 421

Query: 417 RILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHA 476
            I IDG    E+T ES+R+++G V Q++ L + +I +NI +  P+A+ E+++ A   A+A
Sbjct: 422 VIKIDGHDYKELTVESIRAQMGTVNQESFLFNDTIFNNIAFAKPDASMEEVVAAAKIANA 481

Query: 477 HEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSE 536
           H+FI      +  +GY + VG+RG KLSGGQ+QR+ I+R +L + P+++LDEATSALD+E
Sbjct: 482 HDFI-----ENAENGYQSLVGDRGNKLSGGQKQRVCIARAVLANPPIMLLDEATSALDTE 536

Query: 537 VEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAH 596
            E  +Q++LN LM+ +T I IAHRLSTI   D+++V+DKG +VE G+H EL+A+NG+Y  
Sbjct: 537 SEKLVQDALNNLMKNRTSIVIAHRLSTIQHADKIVVIDKGSVVETGSHSELMAKNGLYKR 596

Query: 597 L 597
           L
Sbjct: 597 L 597