Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  245 bits (626), Expect = 4e-69
 Identities = 172/578 (29%), Positives = 296/578 (51%), Gaps = 51/578 (8%)

Query: 51  IIEVSLFGFMGQLVDWLSTSS------PDTFLTEN-----QSTLIGLGLLVLVGMPLLIA 99
           +I   +F F+G L  WLS          + FL EN     +  L+ +G+  L    +   
Sbjct: 47  VIAAIVFLFIGSLA-WLSLGQGVRLMVDEGFLRENGERLNEIILLVIGITALSSSAIFCR 105

Query: 100 FYSLLIHQSLLGN-YPMSIRWLAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMK 158
           FY +    + LG      IR   + +LLK S  FY     G + ++    A  ++  V  
Sbjct: 106 FYLM----TWLGERVSADIRLKVYDHLLKLSPGFYARLRTGEVISRFTADATLLQSVVGS 161

Query: 159 SLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARS 218
           SL + +   V     +V++A    +L   +L+ + + +    ++  K+++++ +  D   
Sbjct: 162 SLSMALRASVTVVGGLVMMAITSLKLTALVLLAVPLVLGPIFFFGRKVRELSRKSQDRVG 221

Query: 219 LMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYL 278
            +   + +S   I TV+ + H  R+ Q   E ++  +     +++      I + +  +L
Sbjct: 222 DLGAYVDESLHEIHTVQAYCHEDRDRQLFSERVEAVMEAARGRIKYRA---ILISLVMFL 278

Query: 279 LVFTIAALSIYLWI------TSAISVGAIAVAVSLSLRINGMSKWIMWEVSALFENIGTV 332
            +  IA ++   W+      + AI+ G ++  +  ++ + G    I   +  +    G  
Sbjct: 279 SILAIALIT---WVGAKDVMSEAITPGELSAFMFYAVMVAGAVATISEVIGEIQRAAGAT 335

Query: 333 VDGMTMLGKPITV--TDKPDAKPLVVKHGGITFDDVSFHYGENKG--------------V 376
              + ++  PI +    KP + P  V+ G ++ + V F Y                   V
Sbjct: 336 ERLIELVETPIDIPLAPKPVSLPAKVR-GELSLEQVRFSYPVQASADSAEEMEAQAGVEV 394

Query: 377 INHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQESLRSK 436
           I  L+L+I PGE+V LVG SGAGKSTL  LL RF+ ++SG I +DG  I+ +  + LR +
Sbjct: 395 IRGLSLHIAPGERVALVGASGAGKSTLFELLQRFYVLDSGVIALDGIDIASLRPQDLRQQ 454

Query: 437 IGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGYDAQV 496
             +V Q++ +   S+ +N+ YG P+A+ E++  A   A A EFI   ++     GY   +
Sbjct: 455 YALVPQESVIFATSVLENVRYGRPDASLEEVQAACVAARADEFIADFSE-----GYQTYL 509

Query: 497 GERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGKTVIA 556
           GERGV+LSGGQ+QRIAI+R +L D P+L+LDEATSALD+  E  ++++L+ LMQG+T + 
Sbjct: 510 GERGVRLSGGQKQRIAIARAILADRPVLLLDEATSALDAVSEQKVKQALDVLMQGRTTLI 569

Query: 557 IAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIY 594
           IAHRL+T+   DR++V+DKG+++  GTH EL+  N +Y
Sbjct: 570 IAHRLATVLNADRILVMDKGELIASGTHGELMQSNSLY 607