Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  847 bits (2188), Expect = 0.0
 Identities = 424/609 (69%), Positives = 509/609 (83%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           MFK FE +    P  E  +PP  ++ FCRHYTRGFE PL +M++L+  +AI+EVSLF FM
Sbjct: 1   MFKRFESWVSALPDQEAVQPPRGIYRFCRHYTRGFELPLALMSILTALLAILEVSLFAFM 60

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
           G LVD L++ SP+T   E    L+ + +LVLV +P+L+  ++L+I+Q LLGNYPMSIRWL
Sbjct: 61  GDLVDLLASHSPETLFAEQGDKLLLMAVLVLVVIPVLVLLHALVIYQGLLGNYPMSIRWL 120

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
           AHRYLLKQS++FYQ++FAGRI+TKVMQT+LAVRETV K LDV VY++VYF +++VI+A A
Sbjct: 121 AHRYLLKQSIAFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFLSMLVIIADA 180

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           D RLM+PML+WL IYV +Q YY+PKLK+V++EQADARS M+GRIVDSYTNI TVKLFSH+
Sbjct: 181 DLRLMLPMLVWLMIYVGLQFYYLPKLKQVSTEQADARSTMTGRIVDSYTNIATVKLFSHT 240

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
           Q+E QYA+E M  FL TV+RQMRLVTG N+ V++ NYLL F++AA+SI+LW  +AI++GA
Sbjct: 241 QKEAQYAKESMTGFLDTVYRQMRLVTGINVSVQVINYLLAFSVAAVSIWLWRDNAITIGA 300

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           IAVAVSLSLR+NGMS+WIMWE+S+LFENIGTV DGM  L +P +V D  +A  L V  G 
Sbjct: 301 IAVAVSLSLRLNGMSQWIMWEISSLFENIGTVADGMNTLSRPTSVQDSDNASQLTVSKGE 360

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           I F+ VSFHYGE  GVI  L+L IKPGEKVGLVGRSGAGKSTLVNLL+RFHDVE G I I
Sbjct: 361 IAFNRVSFHYGEASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSITI 420

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ I EV Q+SLR+ IGMVTQDTSLLHRSIRDNI YG P+A+EE+L  A  QA A+EFI
Sbjct: 421 DGQNIREVEQDSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYEFI 480

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
            GL+DP GN G DAQVGERGVKLSGGQRQRIAI+RVLLK+AP+L+LDEATSALDSE+EAA
Sbjct: 481 QGLSDPEGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIEAA 540

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQESL +LM+GKTVIAIAHRLSTIAAMDRLIVLD+G+IVEQGTHQELI Q GIYA LWAH
Sbjct: 541 IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGKIVEQGTHQELIKQGGIYAQLWAH 600

Query: 601 QTGGFIGCD 609
           QTGGF+G +
Sbjct: 601 QTGGFLGIE 609