Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  259 bits (663), Expect = 2e-73
 Identities = 183/593 (30%), Positives = 307/593 (51%), Gaps = 41/593 (6%)

Query: 24  LWAFCRHYTRGFEKPLIVMALLSTAIA-IIEVSLFGFMGQLVDWLSTSSPDTFLTENQST 82
           LW +   +     K  +++AL    +A +  V L   + QLVD LS +S +      Q  
Sbjct: 22  LWPYLLEF-----KGRVILALACLVVAKMASVGLPFVLKQLVDTLSEASVE------QMI 70

Query: 83  LIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYP-MSIRWLA---HRYLLKQSVSFYQDEFA 138
            + + L++  G   L+      +  +L G     +IR L      +L +  ++F+ +   
Sbjct: 71  AVPIALVLAYGSLRLLNTVISEVRDTLFGRVTERAIRRLGLSVFDHLHRLDLAFHLERRT 130

Query: 139 GRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIV-VILAQADWRLMIPMLIWLAIYVT 197
           G +S  + +    V   +   +   V  ++    +V ++L    W   +  L  +  Y+ 
Sbjct: 131 GGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIGLVVGILLYNYGWAFALITLSAVVAYIL 190

Query: 198 VQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGT 257
             ++          E A A S  + R +DS  N  TVK F++   E++  +  ++ +   
Sbjct: 191 FSIFATEWRTGFVREAAMADSQSNTRAIDSLLNYETVKYFNNEAYESEQYDHALERW-EV 249

Query: 258 VHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVA---------VSLS 308
             R+ RL    +++   A   L+ ++A   +     + +S GA+ +          + L 
Sbjct: 250 AKRKNRL----SLFALNAGQALIISLAMTLMLALAATQVSQGAMTIGDFVLINAFMMQLF 305

Query: 309 LRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSF 368
           + +N +  ++  E+     NI  +    ++L +   + D PDA    +  G + F+ VSF
Sbjct: 306 MPLNFLG-FVYREIRGALANIERM---FSLLDRQPKIEDGPDATSPQIAQGSLKFEGVSF 361

Query: 369 HYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEV 428
            YG+ + +++ ++  I  G KV +VG SGAGKST+V LL RF++ + G I IDG     +
Sbjct: 362 RYGD-RPILSDVSFEIPAGHKVAIVGDSGAGKSTIVKLLFRFYETQQGTITIDGHDTKAL 420

Query: 429 TQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHG 488
           TQ +LRS I +V QDT L + S+ +NI YG P A++EQ+  A   AH   F+  L++   
Sbjct: 421 TQHALRSAIAIVPQDTVLFNDSLMENIRYGLPGASDEQVKAAIELAHLSNFVSQLSE--- 477

Query: 489 NSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNEL 548
             G+  +VGERG+KLSGG++QR+AI+R +LK +PLLV DEATS+LDS  E AI  +L E+
Sbjct: 478 --GWHTKVGERGLKLSGGEKQRVAIARAILKGSPLLVFDEATSSLDSHSEQAILNALKEM 535

Query: 549 MQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQ 601
            +G T + IAHRLST+   D+++VL +G+IVE+G HQ L+A +G+Y  LW  Q
Sbjct: 536 AKGHTSLVIAHRLSTVVDADQILVLSQGKIVERGDHQSLLAADGLYKKLWTVQ 588