Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  874 bits (2257), Expect = 0.0
 Identities = 436/609 (71%), Positives = 522/609 (85%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           MFK FE + +  P GEP +PP  ++AFCRHYT+G+E PLI+M++L+  IA++EVSLFGFM
Sbjct: 1   MFKRFESWVEALPDGEPTKPPTGVYAFCRHYTKGYELPLILMSVLTAFIAMLEVSLFGFM 60

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
           GQLVDWL   SP+T   +  STLI +G++VLV MPLL+ F++L++HQ+LLGNYPMSIRWL
Sbjct: 61  GQLVDWLVKKSPETLYQDEGSTLILMGVMVLVVMPLLVLFHALIMHQTLLGNYPMSIRWL 120

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
           AHRYLLKQSVSFYQ++FAGRI+TKVMQT+LAVRETVMK LDV VY++VYFT+++V++A A
Sbjct: 121 AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVMKLLDVLVYILVYFTSMLVMVASA 180

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           D RL+IPMLIWLA+Y+ +Q Y+VP+LK V++EQADARS M+GRIVDSYTNI TVKLF+H+
Sbjct: 181 DVRLVIPMLIWLALYIGLQWYFVPRLKTVSTEQADARSTMTGRIVDSYTNITTVKLFAHT 240

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
            +E  YA+  M+ FL TV+RQMRLVTG ++ V++ NY+L F+IAA+SI LW  +AISVGA
Sbjct: 241 DKEADYAKASMRSFLDTVYRQMRLVTGISVSVQIINYMLAFSIAAVSIALWSDNAISVGA 300

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           IA+AVSL+LR+NGMS+WIMWE+S+LFENIGTV DGM  L K   + D PDA  LVVK G 
Sbjct: 301 IAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKTTLIQDSPDANTLVVKQGQ 360

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           I F+ VSFHYGE+ GVI+ LNLNIK GEKVGLVGRSGAGKSTLVNLL+RF+DVE G I I
Sbjct: 361 IDFNQVSFHYGEDAGVIDELNLNIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGHICI 420

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ I  V Q+SLRS+IGMVTQDTSLLHR+IR+NILYGNP A+E QL  A  QA AH+FI
Sbjct: 421 DGQDIKAVKQDSLRSQIGMVTQDTSLLHRTIRENILYGNPGASEIQLEHAIKQAQAHDFI 480

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
             LTDP+GN G DAQVGERGVKLSGGQRQR+AI+RVLLK+AP+L+LDEATSALDSEVEAA
Sbjct: 481 NELTDPNGNHGLDAQVGERGVKLSGGQRQRVAIARVLLKNAPILLLDEATSALDSEVEAA 540

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQESL ELMQGKTVIAIAHRLSTIAAMDRLIVLD+G+IVEQGTHQELIA  GIYA LWAH
Sbjct: 541 IQESLYELMQGKTVIAIAHRLSTIAAMDRLIVLDQGRIVEQGTHQELIAAGGIYAQLWAH 600

Query: 601 QTGGFIGCD 609
           QTGGF+G +
Sbjct: 601 QTGGFLGVE 609