Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  280 bits (715), Expect = 2e-79
 Identities = 190/595 (31%), Positives = 317/595 (53%), Gaps = 45/595 (7%)

Query: 24  LWAFCRHYTRGFEKPLIVMALLSTAIA-IIEVSLFGFMGQLVDWLSTSSPDTFLTENQST 82
           LW +   Y     K  + +A+    +A +  V L   +  +VD L  +         Q+ 
Sbjct: 22  LWPYLLEY-----KGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTA------QTL 70

Query: 83  LIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYP-MSIRWLA---HRYLLKQSVSFYQDEFA 138
            + +GL++  G   L+   +  I  +L G     +IR L      +L +  + F+ +   
Sbjct: 71  SVPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRT 130

Query: 139 GRISTKVMQTALAVR--------ETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLI 190
           G +S  + +    V           V   L++ + + ++F    V  A   + + +   I
Sbjct: 131 GGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITF-ISVLAYI 189

Query: 191 WLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEG 250
           W ++  T          +   + A A SL + R +DS  N  TVK F++ + E++  ++ 
Sbjct: 190 WFSVIATEWR------TEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQA 243

Query: 251 MQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAI----AVAVS 306
           +  +     +    +   N    +   + +  + AL+ Y    + +++G      A  + 
Sbjct: 244 LDQWEVAKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQ 303

Query: 307 LSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDV 366
           L + +N +  ++  E+     NI  +    ++L K  ++ DKPDA     K G ++F++V
Sbjct: 304 LFMPLNFLG-FVYREIRGALANIERM---FSLLDKHPSIVDKPDALDFEPKRGELSFENV 359

Query: 367 SFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPIS 426
           SF Y +++ ++ +++  +  G+KV +VG SGAGKSTL+ LL RF+DVE GRILIDGQ I 
Sbjct: 360 SFSY-DDRPILRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIR 418

Query: 427 EVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDP 486
           ++TQ++LR  I +V QDT L + S+ +NI YG PNA+++ +  A   AH  +FI  L+  
Sbjct: 419 QLTQDALRRAIAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQ- 477

Query: 487 HGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLN 546
               G+D +VGERG+KLSGG++QR+AI+R +LK +P+LV DEATS+LDS  E AI  +L 
Sbjct: 478 ----GWDTKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALR 533

Query: 547 ELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQ 601
           E+ +G T + +AHRLSTI   D+++VL KG+IVEQG H  L+AQ+G+YA LW  Q
Sbjct: 534 EVAKGHTSLVVAHRLSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQ 588