Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC-type multidrug transport system, ATPase and permease components from Sphingomonas koreensis DSMZ 15582

 Score =  287 bits (734), Expect = 1e-81
 Identities = 194/603 (32%), Positives = 325/603 (53%), Gaps = 40/603 (6%)

Query: 29  RHYTRGFEKPLIVMALLSTAIAIIEVSLFGFMGQLVDWLSTSSPDTFLTENQSTLIGLGL 88
           RH+ R   +   + A   TA  + E+ +  F G+L+D L+ +     L    + +  LGL
Sbjct: 20  RHWVRQPGRAAYI-AFFITAATVTEIFVPLFAGRLIDALAGNLRSEALALF-AAMASLGL 77

Query: 89  LVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWLA-------HRYLLKQSVSFYQDEFAGRI 141
            ++V           L H +  G  P ++R +        HR + + S  ++ + FAG  
Sbjct: 78  AMVV-----------LRHFAWAGVVPFTLRMMRDVTQDGFHR-VQRFSTDWHANSFAGST 125

Query: 142 STKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLM-IPMLIWLAIYVTVQM 200
             K+ +   A  +T+   L + +   +      ++L    W ++ + M I    YV + +
Sbjct: 126 VRKITRGMWAF-DTLNDVLLLQLLPSIAVLGGTMLLLGWHWPVLGVVMAIGAVAYVAMTV 184

Query: 201 YYVPKLKKVASEQADA-RSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVH 259
               +    A+  ++A  + + G + D+  +   VK F   +RE    E+ +   L    
Sbjct: 185 VLATRWASPAATLSNAWDTKLGGMLSDAIGSNAVVKAFGAEERE----EQRIGGLLAKWA 240

Query: 260 RQMRLVTGFNIWVEMANYLLVFTIAAL----SIYLWITSAISVGAIAVAVSLSLRINGMS 315
           ++ R       W   A   +++ I +     +++LW T A + G +   ++    ++G  
Sbjct: 241 KRTRRTWMRYTWSGSAQIAVLWAIRSAITGTALWLWWTGAATPGDVTFVLASYFVVHGYL 300

Query: 316 KWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSFHYGENKG 375
             + + +  +   +  + + + +  +P+ + D+ DA+P+ +  G + FDDV+F YG ++ 
Sbjct: 301 VDVGFHIHHMQRAVNEMEELVDLHDQPLGIDDRTDAQPIHIGAGEVHFDDVTFRYGGHET 360

Query: 376 VI-NHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQESLR 434
            +  HL L I+ GE+VGLVG SG+GK+T V L+ R +DV  GR+ IDGQ +S  TQ+SLR
Sbjct: 361 PLYEHLTLTIRGGERVGLVGHSGSGKTTFVKLIQRLYDVNEGRVTIDGQDVSHATQQSLR 420

Query: 435 SKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGYDA 494
           ++I +V Q+  L HRS+ DNI Y  P A++ ++  A   A+AH+FI+ L       GY  
Sbjct: 421 AQIAIVQQEPILFHRSLADNIAYARPGASQAEVEAAARLANAHDFIVRLP-----RGYAT 475

Query: 495 QVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGKTV 554
            VGERGVKLSGG+RQR+A++R  L DAP+L+LDEATS+LDSE EA IQ++++ LM+G+T 
Sbjct: 476 LVGERGVKLSGGERQRVALARAFLADAPILILDEATSSLDSESEALIQQAMDRLMKGRTA 535

Query: 555 IAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQ-NGIYAHLWAHQTGGFIGCDEDEV 613
           I IAHRLST+  +DR++V DKG+I+E G H  L+    G Y  L+  Q+G  +  D  ++
Sbjct: 536 IVIAHRLSTVRTLDRILVFDKGRIIEDGDHDTLLVNAGGQYRRLFDRQSGNIVD-DAPKL 594

Query: 614 EEA 616
           EEA
Sbjct: 595 EEA 597