Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., multidrug ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  682 bits (1759), Expect = 0.0
 Identities = 340/621 (54%), Positives = 455/621 (73%), Gaps = 5/621 (0%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           MF  FE    P+P+  P  PP     F    T+G    +  M L++  I + E  LF  +
Sbjct: 1   MFSWFEKLVQPYPEHHPLPPPRGFMRFIWFCTKGVRPYIAAMTLMTAIIGVFEALLFAAL 60

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
           G++VDWL+  +P    ++   TL  L +L+L   PLLIA  ++  HQ+L GN+PM +RW 
Sbjct: 61  GRIVDWLAKIAPSQLWSQEGHTLTWL-VLILAASPLLIALQTMYKHQTLAGNFPMLLRWN 119

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            HR +L QS+SFYQ+EFAGR++TKVMQTALAVR+  M   D+ V++ +YF  ++ ++   
Sbjct: 120 FHRLMLSQSMSFYQNEFAGRVATKVMQTALAVRDFCMIVGDILVFITIYFATLIGVVGSF 179

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           D  ++ P  IWLA +     Y+VP+L  VA  QADARSLM+GRI D+YTNI TVKLFSH+
Sbjct: 180 DIWMLAPFFIWLAAFAVALRYFVPRLSAVARNQADARSLMTGRITDAYTNIATVKLFSHA 239

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
            RE  YA   M++FL TV++QMRLV+GF +   + N +L+     +S+YLW    + VGA
Sbjct: 240 GREADYARSAMREFLVTVNQQMRLVSGFEVVNHLLNMVLIIGATGVSLYLWTQGKVGVGA 299

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           +A + +++LR+NG++ W+MWE+S+LFE++GTV DG+  L +   V D PDA+PL V  G 
Sbjct: 300 VAASTAMALRLNGIAHWVMWEMSSLFEHVGTVQDGINTLARAHDVKDAPDAQPLKVSQGE 359

Query: 361 ITFDDVSFHYG--ENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRI 418
           + F+ VSF YG    + V++ L+L I+PGEK+GLVGRSGAGKST+VNLLLRF+D+E GRI
Sbjct: 360 LRFEGVSFSYGGAAPRPVVDKLDLVIRPGEKIGLVGRSGAGKSTIVNLLLRFYDIEGGRI 419

Query: 419 LIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHE 478
            IDGQ I+ VTQ+SLR++IGMVTQDTSLLHRS+R+NI YG P+A++ ++  A  +A AH+
Sbjct: 420 TIDGQDIAHVTQDSLRAQIGMVTQDTSLLHRSVRENITYGRPDASDAEMTHAAERAEAHD 479

Query: 479 FILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVE 538
           FI  L D  G +GYDA VGERGVKLSGGQRQRIAI+RV+LKDAP+L+LDEATSALDSEVE
Sbjct: 480 FIGTLADAKGRTGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVE 539

Query: 539 AAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLW 598
           AAIQ SL +LM+GKTV+AIAHRLSTIAAMDRLIVLD+G+IVEQG+H EL+A NG+YA LW
Sbjct: 540 AAIQTSLYKLMEGKTVVAIAHRLSTIAAMDRLIVLDQGRIVEQGSHAELLAANGLYARLW 599

Query: 599 AHQTGGFIGCDEDEVEEAILA 619
           +HQ+GGF+G  E+E + A++A
Sbjct: 600 SHQSGGFLG--EEEEDAAVMA 618