Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., multidrug resistance ABC transporter, ATP-binding and permease components from Caulobacter crescentus NA1000

 Score =  275 bits (704), Expect = 3e-78
 Identities = 177/483 (36%), Positives = 268/483 (55%), Gaps = 19/483 (3%)

Query: 129 SVSFYQDEFAG---RISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLM 185
           S  ++ D FAG   R  T+ M    +V + V   L   V V++  +  + +L +     +
Sbjct: 124 SSDWHADSFAGATVRKLTRAMWGYDSVTDAVTIWLGPGVIVLIGLS--IAMLVRQPLAGI 181

Query: 186 IPMLIWLAIYVTVQMYYVPKLKKVASEQADAR-SLMSGRIVDSYTNIMTVKLFSHSQRET 244
           I +++ +A Y+TV +    +  + ++ +++A  S + G + D+ T+  TVK F    RE 
Sbjct: 182 ISLVV-VAAYLTVNLVITERYVRPSNLKSNALDSKIGGALADAVTSNPTVKSFGAETREA 240

Query: 245 QYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALS---IYLWITSAISVGAI 301
           +   +    +   V       T  ++W+   N LLV   A L+   ++ W     + G +
Sbjct: 241 ERLAKVTAQWREAVMVTWNRFT--DVWLGQ-NLLLVVLQAGLTGAMVWGWTQGTATPGDV 297

Query: 302 AVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGI 361
           A A++  + ++G  + +   +  L + +    D          + D P+A       G I
Sbjct: 298 AFAITAFMLMSGYLRNLGENIRMLQKGLDDTEDVAAWTRLAPQIADDPNAPEFQPGSGAI 357

Query: 362 TFDDVSFHY-GENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
            F DV+F Y      + +  +L I PGE+V LVG +G+GKST V L+ R HD++ G ++I
Sbjct: 358 EFQDVTFRYKAAGAPLYDRFSLKIAPGERVALVGPTGSGKSTFVKLIQRLHDLQDGAVVI 417

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ +S V Q SLR  I +V QD +L HR++ +NI YG P+AT E++  A  +A AHEFI
Sbjct: 418 DGQDVSTVKQASLRRAIAVVPQDPALFHRTLFENIAYGKPDATREEVEDAAIKARAHEFI 477

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
           L L       GYD  VGERGVKLSGG+RQR+AI+R  L DAP+LVLDEATS+LD E E  
Sbjct: 478 LRLP-----KGYDTLVGERGVKLSGGERQRVAIARAFLADAPILVLDEATSSLDVETEGH 532

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           +QE+   LM+G+T I IAHRLST+   DR++V   G++VE+G H EL A+ G+YA L A 
Sbjct: 533 VQEAAEALMEGRTTIVIAHRLSTVRGADRILVFQGGRVVEEGRHAELTAKGGVYARLNAI 592

Query: 601 QTG 603
             G
Sbjct: 593 SAG 595