Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  247 bits (630), Expect = 1e-69
 Identities = 179/561 (31%), Positives = 285/561 (50%), Gaps = 40/561 (7%)

Query: 53  EVSLFGFMGQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGN 112
           +V++  F   +   +  + P T L       +GL L ++        F S  +   L   
Sbjct: 69  DVAINNFYYYVSQMIQDNGPTTALI-----FLGLFLALMTLFKTSCYFASSAVMIPLRTG 123

Query: 113 YPMSIRWLAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTA 172
               IR + +  +++  + F+ +E  G I  ++      V  ++  SLD+ +   +    
Sbjct: 124 VVRDIRIMVYAKVMRLPMGFFSEERKGDIIARMSGDVGEVENSITSSLDMLIKSPIMIIL 183

Query: 173 IVVILAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIM 232
             + L    W+L +  ++ L     +      KLK+ + E     S    ++ ++   + 
Sbjct: 184 YFITLIATSWKLTLFTVLVLPAMGWLMGKVGRKLKRQSLEAQGKWSDTMSQLEETLGGLR 243

Query: 233 TVKLFSHSQRETQYAEEGMQDFLGTVHRQMR-LVTGFNIWVEMANYLLVF--TIAALSIY 289
            +K F         AE+ M D       ++R  V    +   +A+ +  F  TI  +S+ 
Sbjct: 244 IIKAF--------IAEDRMIDRFTRCSNELRDAVNKVAMRQALAHPMSEFLGTILIVSV- 294

Query: 290 LWITSAISVGA---------IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLG 340
           LW   A+ +G          I   V L   IN +      + +    NI   +  M  + 
Sbjct: 295 LWFGGALILGHNSSLTAPTFIFYMVILYSVINPLK-----DFAKAGYNIPKGLASMERVD 349

Query: 341 KPI----TVTDKPDAKPLVVKHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRS 396
           K +     + + P+ KPL   +  I F D+SF Y   + V+ H+NL +  G+ V LVG+S
Sbjct: 350 KILKAENNIKEIPNPKPLTGMNDRIEFKDISFSYDGKREVLKHVNLTVPKGKTVALVGQS 409

Query: 397 GAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNIL 456
           G+GKSTLV+LL R+HDV+ G I IDG  I +V    LRS IG V Q+  L + +  +NI 
Sbjct: 410 GSGKSTLVDLLPRYHDVQGGDITIDGTSIKDVRIADLRSLIGNVNQEAILFNDTFFNNIA 469

Query: 457 YGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRV 516
           +G  NAT EQ+++A   A+AH+FI+   +     GY+  +G+RG KLSGGQRQR++I+R 
Sbjct: 470 FGVENATMEQVIEAAKIANAHDFIMEKPE-----GYNTNIGDRGGKLSGGQRQRVSIARA 524

Query: 517 LLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKG 576
           +LK+ P+L+LDEATSALD+E E  +QE+L  LM+ +T IAIAHRLSTI   D + VL +G
Sbjct: 525 ILKNPPILILDEATSALDTESERLVQEALERLMKTRTTIAIAHRLSTIKNADEICVLYEG 584

Query: 577 QIVEQGTHQELIAQNGIYAHL 597
           +IVE+G H+EL+  +G Y  L
Sbjct: 585 EIVERGRHEELLELDGYYKRL 605