Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  281 bits (719), Expect = 6e-80
 Identities = 193/595 (32%), Positives = 315/595 (52%), Gaps = 45/595 (7%)

Query: 24  LWAFCRHYTRGFEKPLIVMALLSTAIA-IIEVSLFGFMGQLVDWLSTSSPDTFLTENQST 82
           LW +   Y     K  + +A+    +A +  V L   +  LVD L  +         Q+ 
Sbjct: 22  LWPYLLEY-----KGRVALAMSCLIVAKLASVGLPFILKDLVDTLDANKTA------QAL 70

Query: 83  LIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYP-MSIRWLA---HRYLLKQSVSFYQDEFA 138
            + +GL++  G   L+   +  I  +L G     +IR L      +L +  + F+ +   
Sbjct: 71  SVPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRT 130

Query: 139 GRISTKVMQTALAVR--------ETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLI 190
           G +S  + +    V           V   L++ + + ++F    +  A   +  ++   I
Sbjct: 131 GGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGIAFAAITFTSVMAY-I 189

Query: 191 WLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEG 250
           W ++  T          +   + A A SL + R +DS  N  TVK F++ + E+   ++ 
Sbjct: 190 WFSVVATEWR------TEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESDRYDQA 243

Query: 251 MQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAI----AVAVS 306
           +  +     +    +   N    +   L +  + AL+ Y    + +++G      A  + 
Sbjct: 244 LDQWEVAKRKNRLSLFALNGGQALIIALAMTAMMALAAYKVTNNEMTLGDFVLINAFMMQ 303

Query: 307 LSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDV 366
           L + +N +  ++  E+     NI  +    ++L K   + DKPDA     K G ++F+ V
Sbjct: 304 LFMPLNFLG-FVYREIRGALANIERM---FSLLDKHPRIVDKPDAFDFEPKRGELSFEHV 359

Query: 367 SFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPIS 426
           SF Y +++ ++ +++  +  G+KV +VG SGAGKSTL+ LL RF+DVE GRILIDGQ I 
Sbjct: 360 SFSY-DDRPILRNVSFKVTAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIR 418

Query: 427 EVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDP 486
           ++TQ++LR  I +V QDT L + S+ +NI YG P+AT+E++  A   AH   FI  L+  
Sbjct: 419 QLTQDALRRAIAIVPQDTVLFNDSLVENIRYGRPDATDEEVRHAIKLAHLEHFIASLSQ- 477

Query: 487 HGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLN 546
               G+D +VGERG+KLSGG++QR+AI+R +LK +P+LV DEATS+LDS  E AI  +L 
Sbjct: 478 ----GWDTKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALR 533

Query: 547 ELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQ 601
           E+ +G T + +AHRLSTI   D+++VL +G+IVEQG HQ L+AQNG+YA LW  Q
Sbjct: 534 EVAKGHTSLVVAHRLSTIVDADQIVVLSQGEIVEQGNHQSLLAQNGLYAKLWRIQ 588