Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (428), Expect = 7e-47
 Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 14/299 (4%)

Query: 7   MVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLYH 66
           M ++  +V+   L AA +   +S   V   L+ALE R GV+L+NR+TR   LTE G  Y+
Sbjct: 1   MTVYVKVVETGSLTAAAQACEMSTTMVGNHLRALEQRLGVRLINRTTRRQRLTEFGSTYY 60

Query: 67  QACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYLY 126
           Q CLE+L  V ++E L +    E  GTL+++AP   G + ++P LA F++++P+V   + 
Sbjct: 61  QRCLEVLGLVADSERLAEQTQGEPSGTLRITAPLTFGTERLSPALAEFSQRFPQVKLDVM 120

Query: 127 LNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLAQ 186
           L +   +L E G DV IR G   D  LI+R L      +CASPAYLAR+G P+ P DL +
Sbjct: 121 LTNQRLDLLEHGFDVAIRLGH-PDPKLIARPLVDYTLTICASPAYLARRGTPEQPADLQR 179

Query: 187 HDCLAMVRSNEE-----MKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALKS 241
           HDCL+   S  +      + W     +    + V      +    + + ALAGMG+ +  
Sbjct: 180 HDCLSFAYSAADEWRFAQEHWPINGPDGEIKVPVNGPMLINSSSGLHRAALAGMGVVMLP 239

Query: 242 ILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
              V  DL    LV +L  Y              ++++Y   +Y+  +LR F++F +E+
Sbjct: 240 DALVAQDLKDGHLVALLQDY--------QLPHRPMSLMYAQDRYRLPKLRSFVEFALEK 290