Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  187 bits (476), Expect = 2e-52
 Identities = 113/302 (37%), Positives = 164/302 (54%), Gaps = 9/302 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M +F D+ LF        L+AA R + LS A  +A L+ +E   G +LL RSTR L LT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDLSAAVASAALKRIEQHLGARLLARSTRSLRLTA 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + +     L+S+ E   LL +G  +V G L++SAP D+G+  + P L AF  ++P 
Sbjct: 61  EGEGFLEYARAALSSLDEGRRLLTSGQDQVSGVLQLSAPSDLGRNLLLPWLDAFQREHPG 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLAT-SRRVLCASPAYLARKGIPK 179
           +   L L D I++L +  +D+ +RYG+  DSSL++  +A  +RRVLCASP YL R G P 
Sbjct: 121 LTVRLLLGDRIADLFKQPVDIALRYGDPEDSSLVALPIAADNRRVLCASPDYLDRHGAPH 180

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
             + LAQH+CL  +  +     W F + ++   +TV    F+DD +V+R+WA+AG GIA 
Sbjct: 181 QLEQLAQHNCLLYMLGSRVHDRWGFHDGKREVSLTVSGDRFSDDADVVRRWAVAGAGIAY 240

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
           KS LDV  D+   RL  +L               A LN+L   R    K + L  D L  
Sbjct: 241 KSWLDVSTDVQAGRLKILL--------PHLQCERAPLNLLCAHRAQLSKPINLLRDMLQA 292

Query: 300 QC 301
           +C
Sbjct: 293 RC 294