Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  192 bits (487), Expect = 1e-53
 Identities = 108/300 (36%), Positives = 166/300 (55%), Gaps = 10/300 (3%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M+ F +M +FA ++++    AA  +L LS   V+ +L  LE R GV+LLNRSTR L +T 
Sbjct: 1   MNPFEEMRIFAQVMESGSFTAAAEKLGLSKQFVSRKLMELEQRLGVRLLNRSTRRLDVTP 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  YH+A L +LN + + E  +   + E RGT+++SAP      H+  +L  F ++YP 
Sbjct: 61  LGQRYHEAALRLLNELEQVEQGISGQTSEPRGTIRLSAPLSFAMAHLGSLLPLFLQRYPG 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   + L+D   +L   G D+ +R G L DS+LI+R++AT  RV CASPAYLA+KG P  
Sbjct: 121 VSVEVDLSDRSVDLLGEGYDLALRIGVLEDSTLIARRIATIERVYCASPAYLAQKGTPAR 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P+DL  HDCL    S +    W F    +   + V  +  A++G+++R  A+AGMGI   
Sbjct: 181 PEDLRNHDCLPYGHSRQVQ--WRFVGAGKPLTLEVTGRMRANNGDLLRDAAIAGMGITYL 238

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
               + D L   RL+ VL+G+              L+ +Y   +   + ++  ++FL EQ
Sbjct: 239 PAFILGDALKDGRLIKVLEGF--------ETEPLALSAVYPQHRQSARPVQALVEFLREQ 290