Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  189 bits (480), Expect = 7e-53
 Identities = 115/302 (38%), Positives = 165/302 (54%), Gaps = 9/302 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M +F D+ LF        L+AA R + LS A  +A L+ +E   G +LL RSTR L LT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDLSAAVASAALKRIEQHLGARLLARSTRSLRLTA 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + +     L+S+ E   LL +G  +V G L++SAP D+G+  + P L AF  ++P 
Sbjct: 61  EGEGFLEYARAALSSLDEGRRLLTSGQDQVSGVLQLSAPSDLGRNLLLPWLDAFQREHPG 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLA-TSRRVLCASPAYLARKGIPK 179
           +   L L D I++L +  +D+ +RYGE  DSSL++  +A  + RVLCASP YLAR+G P 
Sbjct: 121 LTVRLLLGDRIADLFKQPVDIALRYGEPEDSSLVALPVAPDNHRVLCASPDYLARQGEPH 180

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
             + LAQH+CL  +  +     W F + ++   +TV    F+DD +V+R+WA+AG GIA 
Sbjct: 181 QLEQLAQHNCLLYMLGSRVHDRWAFHDGKREVSLTVSGDRFSDDADVVRRWAVAGAGIAY 240

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
           KS LDV  D        VL G +K          A LN+L   R    K + L  D L  
Sbjct: 241 KSWLDVSTD--------VLAGRLKILLPHLQCERAPLNLLCAHRAQLSKPINLLRDMLQA 292

Query: 300 QC 301
           +C
Sbjct: 293 RC 294