Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  187 bits (474), Expect = 3e-52
 Identities = 112/304 (36%), Positives = 172/304 (56%), Gaps = 13/304 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           +D+   M  F + V   G AAA R + +  + V+ ++QALE+  GV+LL R+TR L LTE
Sbjct: 1   LDRIECMRAFVATVGANGFAAAARAMDVPRSKVSKQIQALEEAIGVQLLQRTTRSLHLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           +G  Y++A  E++ SV E E   + G  E+RG L+V+AP   G + + P++  F EQ+P 
Sbjct: 61  AGAEYYEAAREVIASVDEAEQRARNGIGELRGVLRVNAPMSFGLRRLGPLIPLFHEQHPN 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           +   L L+D   +    G DV IR   L DSSL++R LA + R++ ASPAYL R G P++
Sbjct: 121 IELQLVLSDQQVDPVRGGFDVTIRIASLPDSSLVARLLAPAPRIMVASPAYLERAGTPQS 180

Query: 181 PQDLAQHDCL--AMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIA 238
           P+DL+ H CL    ++S   ++  +  E ++   + V     A++G+++ Q A AGMGIA
Sbjct: 181 PKDLSTHQCLNYGYLQSGVSLQLSNGHETQR---VHVTGPLHANNGDLLAQAAEAGMGIA 237

Query: 239 LKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLI 298
           L     V++ L   RLV VL            A    +N +Y S +  P++ R FI+FL+
Sbjct: 238 LLPSFIVEEALAAGRLVAVL--------CEWQAPPISINAVYSSARRVPQKTRAFIEFLV 289

Query: 299 EQCA 302
            Q A
Sbjct: 290 AQLA 293