Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  168 bits (426), Expect = 1e-46
 Identities = 107/310 (34%), Positives = 164/310 (52%), Gaps = 14/310 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           +D+   M +F        L+AA R L +SPA  +  + ALE R GVKL +RSTR LSLTE
Sbjct: 2   LDRITSMRVFTRAATAGSLSAAARHLDMSPAMASKHVDALESRLGVKLFHRSTRRLSLTE 61

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           +G  Y +AC  IL  + E E  + +   E  G L+++ P   G Q IAP++  F+ ++P 
Sbjct: 62  AGSNYLEACQRILPEIEEAEASVASQRIEATGLLRMNVPLTFGTQFIAPLIPEFSRRHPA 121

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   L L D+  +L + G D+ +R G+L DSS+ +R+LA    V+CA+P YL  +G+P++
Sbjct: 122 VKVELGLTDSRVDLIDGGWDMAVRIGQLQDSSMQARQLADCPLVVCAAPRYLDERGVPRS 181

Query: 181 PQDLAQHDCLAMVRSN-EEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
             DL QH+CL     N    K W F  N + + I V     A++GE +   A+ G G+  
Sbjct: 182 VADLGQHNCLGYSLPNLAAAKVWPFGRNGEVR-IAVNGDLVANNGEALVAAAIGGQGLIY 240

Query: 240 KSILDVQDDLNQQRLVTV-LDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLI 298
           K    V   L +  LV + LD                ++V+Y   +  P ++R+ ID+L+
Sbjct: 241 KPQFIVAKALRRGELVAIELD--------QPCVGLGGIHVVYPPDRRPPAKVRVMIDYLV 292

Query: 299 EQCAFRLGNQ 308
           +  +   GNQ
Sbjct: 293 DAFS---GNQ 299