Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  188 bits (478), Expect = 1e-52
 Identities = 111/300 (37%), Positives = 169/300 (56%), Gaps = 10/300 (3%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M+ F DM +F  ++++  L AA  +L LS   V+ RL  LE+R GV+LLNRSTR L +T 
Sbjct: 1   MNPFEDMRMFCQVMESGSLTAASDKLGLSKQFVSRRLMQLEERLGVRLLNRSTRRLDVTP 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y+++ L +L  + + E  +   + E RGTL+VSAP      H+A +L  F ++Y +
Sbjct: 61  LGQSYYESALRLLAELEQVEQGITGQNNEPRGTLRVSAPLSFAVTHLACLLPLFLQRYRD 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   + L+D   ++   G DVV+R G L DSSLI+R++A+  RV CASPAYLA +G P+ 
Sbjct: 121 VSVEVDLSDRPVDVISEGYDVVLRIGVLEDSSLIARRIASIDRVYCASPAYLAERGTPQN 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P+DL  HDCL    S +    W FQ  ++   + V  +  A++GE++R+ A+AG+GI   
Sbjct: 181 PEDLHTHDCLPYGHSRQAQ--WRFQGQDKPLTLNVSGRMRANNGELLRESAIAGLGITYL 238

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
               V   L +  LV VLD                L+ +Y   +   + ++ FI+FL E+
Sbjct: 239 PTFIVGAALREGSLVRVLD--------DLRPEPLTLSAVYPQHRQASRPVQAFIEFLRER 290