Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (431), Expect = 3e-47
 Identities = 97/292 (33%), Positives = 159/292 (54%), Gaps = 9/292 (3%)

Query: 6   DMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLY 65
           D+ L  ++ + + L+AA R L++SP  ++ RL+ LE + G+ L +R  R LSLT  G  +
Sbjct: 6   DLRLAVTLSRCESLSAAARILNVSPPALSMRLRKLETQLGITLASRDARRLSLTADGERF 65

Query: 66  HQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYL 125
            +   ++L  +       +   + + GTL+++AP   G+Q IAP+LA F   +P++   L
Sbjct: 66  ARESAQLLEQLEALPESFRQRDERLVGTLRLAAPFGYGRQRIAPLLARFARLHPQLCLQL 125

Query: 126 YLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLA 185
            L +          D VI  G L DS  I+  LA + R LCASPAY+ + G+P TP+ LA
Sbjct: 126 DLRETPWPDRHDS-DAVIHIGSLNDSQWIAMPLAQNHRWLCASPAYIEQHGVPSTPEQLA 184

Query: 186 QHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALKSILDV 245
            H C+ +  ++E++  WH  + +  K + + P   ++DG V R+WA  G+GI L+S  DV
Sbjct: 185 GHRCICIRENDEDVTLWHLSKGQTKKTLRIEPALLSNDGSVARRWAEQGLGIVLRSQWDV 244

Query: 246 QDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFL 297
            D +   RLV VL        A    + A +N+L   R+++  R++   +FL
Sbjct: 245 SDAIASGRLVRVL--------ADWQLASAPINLLVPVRKHRSARVQALTEFL 288